RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 TOR2AQ5JU69 321 aa12.71□□□□□ -0.38
UBE3B-210ENST00000539599 SLC22A10Q63ZE4 541 aa12.71□□□□□ -0.38
UBE3B-210ENST00000539599 OR10K2Q6IF99 312 aa12.71□□□□□ -0.38
UBE3B-210ENST00000539599 ZNF767PQ75MW2 155 aa12.71□□□□□ -0.38
UBE3B-210ENST00000539599 CMIPQ8IY22 773 aa12.71□□□□□ -0.38
UBE3B-210ENST00000539599 ZNF721Q8TF20 911 aa12.71□□□□□ -0.38
UBE3B-210ENST00000539599 ADIPOR1Q96A54 375 aa12.71□□□□□ -0.38
UBE3B-210ENST00000539599 CCDC120Q96HB5 630 aa12.71□□□□□ -0.38
UBE3B-210ENST00000539599 RANBP3Q9H6Z4 567 aaPredicted RBP12.71□□□□□ -0.38
UBE3B-210ENST00000539599 GPR27Q9NS67 375 aa12.71□□□□□ -0.38
UBE3B-210ENST00000539599 PRODH2Q9UF12 536 aa12.71□□□□□ -0.38
UBE3B-210ENST00000539599 ATXN7L1Q9ULK2 861 aaPredicted RBP12.71□□□□□ -0.38
UBE3B-210ENST00000539599 ICMTO60725 284 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 CTLA4P16410 223 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 CXCR1P25024 350 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 ART1P52961 327 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 TSPAN5P62079 268 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 CFHR1Q03591 330 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 FMODQ06828 376 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 NSDHLQ15738 373 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 ACKR1Q16570 336 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 PCGF3Q3KNV8 242 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 CHMP1BQ7LBR1 199 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 LCORQ96JN0 433 aaPredicted RBP12.7□□□□□ -0.38
UBE3B-210ENST00000539599 FBXL3Q9UKT7 428 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 IGHV1OR15-9A0A0B4J2B8 117 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 C10orf142B7Z368 130 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 ZNF354AO60765 605 aaPredicted RBP12.7□□□□□ -0.38
UBE3B-210ENST00000539599 TPOP07202 933 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 VSIG10L2P0DP72 767 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 PNMTP11086 282 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 DYRK1AQ13627 763 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 GRK1Q15835 563 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 TCTE1Q5JU00 501 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 SFRP5Q5T4F7 317 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 B3GNTL1Q67FW5 361 aaPredicted RBP12.7□□□□□ -0.38
UBE3B-210ENST00000539599 OR1L3Q8NH93 324 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 HAVCR1Q96D42 359 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 RBP7Q96R05 134 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 INTS14Q96SY0 518 aa12.7□□□□□ -0.38
UBE3B-210ENST00000539599 CGGBP1Q9UFW8 167 aaPredicted RBP12.7□□□□□ -0.38
UBE3B-210ENST00000539599 ANKRD20A5PA0PJZ0 165 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 ZSCAN5BA6NJL1 495 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 POM121CA8CG34 1229 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 PDCD5O14737 125 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 HIST1H2ABP04908 130 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 FOLR1P15328 257 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 IL12BP29460 328 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 PPICP45877 212 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 CSNK1EP49674 416 aaKnown RBP12.69□□□□□ -0.38
UBE3B-210ENST00000539599 INSM1Q01101 510 aaPredicted RBP12.69□□□□□ -0.38
UBE3B-210ENST00000539599 HIST3H2AQ7L7L0 130 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 SIX5Q8N196 739 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 OR51A2Q8NGJ7 313 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 OR5M1Q8NGP8 315 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 HIST1H2ACQ93077 130 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 CHST6Q9GZX3 395 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 MRPL22Q9NWU5 206 aaKnown RBP12.69□□□□□ -0.38
UBE3B-210ENST00000539599 PIPOXQ9P0Z9 390 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 CTSFQ9UBX1 484 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 CTDSPLO15194 276 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 BLKP51451 505 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 CCR5P51681 352 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 EBPQ15125 230 aaKnown RBP12.69□□□□□ -0.38
UBE3B-210ENST00000539599 LINC00346Q8IVM7 164 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 TSTD1Q8NFU3 115 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 METTL21AQ8WXB1 218 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 MIB2Q96AX9 1013 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 NXPE2Q96DL1 559 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 PTDSS2Q9BVG9 487 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 NARFLQ9H6Q4 476 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 C8orf33Q9H7E9 229 aaPredicted RBP12.69□□□□□ -0.38
UBE3B-210ENST00000539599 B9D1Q9UPM9 204 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 HRH3Q9Y5N1 445 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 RNF215Q9Y6U7 377 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 TRAV18A0A075B6X5 111 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 TRBV5-5A0A0J9YX44 114 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 BGLAPP02818 100 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 IGKV3-11P04433 115 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 RLN1P04808 185 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 TACSTD2P09758 323 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 CXCL2P19875 107 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 RORAP35398 523 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 FASLGP48023 281 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 POU3F4P49335 361 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 SLC25A1P53007 311 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 PUDPQ08623 228 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 PLCXD2Q0VAA5 305 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 SNTA1Q13424 505 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 ARHGAP40Q5TG30 622 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 EEF1A1P5Q5VTE0 462 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 FAM69BQ5VUD6 431 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 CORO6Q6QEF8 472 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 OR4C16Q8NGL9 310 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 DUSP19Q8WTR2 217 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 LRFN5Q96NI6 719 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 SORCS2Q96PQ0 1159 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 MKL2Q9ULH7 1088 aa12.69□□□□□ -0.38
UBE3B-210ENST00000539599 A0A1B0GVI7 797 aa12.68□□□□□ -0.38
UBE3B-210ENST00000539599 RENP00797 406 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms