RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 CSNK1A1LQ8N752 337 aa18.42■□□□□ 0.54
TMEM260-203ENST00000539559 NSMAFQ92636 917 aa18.42■□□□□ 0.54
TMEM260-203ENST00000539559 SLC22A18Q96BI1 424 aa18.42■□□□□ 0.54
TMEM260-203ENST00000539559 MRPL48Q96GC5 212 aaKnown RBP18.42■□□□□ 0.54
TMEM260-203ENST00000539559 FBXO4Q9UKT5 387 aa18.42■□□□□ 0.54
TMEM260-203ENST00000539559 EYSQ5T1H1 3165 aa18.42■□□□□ 0.54
TMEM260-203ENST00000539559 FAM74A7A6NL05 159 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 D6RAR5 112 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 K7EQS6 105 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 M0QYG6 137 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 ABHD16AO95870 558 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 ITGA5P08648 1049 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 KIR2DL1P43626 348 aaPredicted RBP18.41■□□□□ 0.54
TMEM260-203ENST00000539559 DEFA5Q01523 94 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 KIR2DS3Q14952 304 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 FAM74A3Q4VXF1 159 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 ELP2Q6IA86 826 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 ZNF227Q86WZ6 799 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 PRSS35Q8N3Z0 413 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 WDR13Q9H1Z4 485 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 POFUT1Q9H488 388 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 LDAHQ9H6V9 325 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 LAMP5Q9UJQ1 280 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 ARPC3O15145 178 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 EGFP01133 1207 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 TFF2Q03403 129 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 ZNHIT3Q15649 155 aaPredicted RBP18.41■□□□□ 0.54
TMEM260-203ENST00000539559 ZNF776Q68DI1 518 aaPredicted RBP18.41■□□□□ 0.54
TMEM260-203ENST00000539559 SLC16A9Q7RTY1 509 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 ZNF550Q7Z398 422 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 OR2G2Q8NGZ5 317 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 MED9Q9NWA0 146 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 RABL2AQ9UBK7 228 aaPredicted RBP18.41■□□□□ 0.54
TMEM260-203ENST00000539559 STEAP1Q9UHE8 339 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 MRTO4Q9UKD2 239 aaKnown RBP18.41■□□□□ 0.54
TMEM260-203ENST00000539559 RABL2BQ9UNT1 228 aa18.41■□□□□ 0.54
TMEM260-203ENST00000539559 TRAV14DV4A0A0A6YYC5 116 aa18.4■□□□□ 0.54
TMEM260-203ENST00000539559 OR4C45A6NMZ5 311 aa18.4■□□□□ 0.54
TMEM260-203ENST00000539559 TACSTD2P09758 323 aa18.4■□□□□ 0.54
TMEM260-203ENST00000539559 PRKACAP17612 351 aa18.4■□□□□ 0.54
TMEM260-203ENST00000539559 CSRP1P21291 193 aaKnown RBP18.4■□□□□ 0.54
TMEM260-203ENST00000539559 FAUP35544 74 aaKnown RBP18.4■□□□□ 0.54
TMEM260-203ENST00000539559 UBXN2BQ14CS0 331 aa18.4■□□□□ 0.54
TMEM260-203ENST00000539559 ATXN7L3Q14CW9 347 aaPredicted RBP18.4■□□□□ 0.54
TMEM260-203ENST00000539559 TMEM205Q6UW68 189 aa18.4■□□□□ 0.54
TMEM260-203ENST00000539559 NDUFAF7Q7L592 441 aa18.4■□□□□ 0.54
TMEM260-203ENST00000539559 PLPP7Q8NBV4 271 aa18.4■□□□□ 0.54
TMEM260-203ENST00000539559 PTDSS2Q9BVG9 487 aa18.4■□□□□ 0.54
TMEM260-203ENST00000539559 ETV7Q9Y603 341 aa18.4■□□□□ 0.54
TMEM260-203ENST00000539559 FANCMQ8IYD8 2048 aa18.4■□□□□ 0.54
TMEM260-203ENST00000539559 TRBV5-5A0A0J9YX44 114 aa18.4■□□□□ 0.54
TMEM260-203ENST00000539559 TNFSF14O43557 240 aa18.4■□□□□ 0.54
TMEM260-203ENST00000539559 CSN2P05814 226 aa18.4■□□□□ 0.54
TMEM260-203ENST00000539559 POMZP3Q6PJE2 187 aa18.4■□□□□ 0.54
TMEM260-203ENST00000539559 SLC35D2Q76EJ3 337 aa18.4■□□□□ 0.54
TMEM260-203ENST00000539559 OR6N1Q8NGY5 312 aa18.4■□□□□ 0.54
TMEM260-203ENST00000539559 MNTQ99583 582 aa18.4■□□□□ 0.54
TMEM260-203ENST00000539559 SLC38A3Q99624 504 aa18.4■□□□□ 0.54
TMEM260-203ENST00000539559 APMAPQ9HDC9 416 aa18.4■□□□□ 0.54
TMEM260-203ENST00000539559 IFT46Q9NQC8 304 aa18.4■□□□□ 0.54
TMEM260-203ENST00000539559 OR10H1Q9Y4A9 318 aa18.4■□□□□ 0.54
TMEM260-203ENST00000539559 CCSO14618 274 aa18.39■□□□□ 0.54
TMEM260-203ENST00000539559 FOXS1O43638 330 aa18.39■□□□□ 0.54
TMEM260-203ENST00000539559 HPP00738 406 aa18.39■□□□□ 0.54
TMEM260-203ENST00000539559 IL32P24001 234 aa18.39■□□□□ 0.54
TMEM260-203ENST00000539559 MPGP29372 298 aa18.39■□□□□ 0.54
TMEM260-203ENST00000539559 CCKBRP32239 447 aa18.39■□□□□ 0.54
TMEM260-203ENST00000539559 CBLN3Q6UW01 205 aa18.39■□□□□ 0.54
TMEM260-203ENST00000539559 TSEN15Q8WW01 171 aaKnown RBP18.39■□□□□ 0.54
TMEM260-203ENST00000539559 FAM60AQ9NP50 221 aa18.39■□□□□ 0.54
TMEM260-203ENST00000539559 CDV3Q9UKY7 258 aaKnown RBP18.39■□□□□ 0.54
TMEM260-203ENST00000539559 SLC22A13Q9Y226 551 aa18.39■□□□□ 0.54
TMEM260-203ENST00000539559 ELOA3DA6NLF2 546 aaPredicted RBP18.39■□□□□ 0.53
TMEM260-203ENST00000539559 C17orf51A8MQB3 221 aa18.39■□□□□ 0.53
TMEM260-203ENST00000539559 CALCRP30988 508 aa18.39■□□□□ 0.53
TMEM260-203ENST00000539559 RPS4XP62701 263 aaKnown RBP18.39■□□□□ 0.53
TMEM260-203ENST00000539559 BTG2P78543 158 aa18.39■□□□□ 0.53
TMEM260-203ENST00000539559 C2orf76Q3KRA6 126 aa18.39■□□□□ 0.53
TMEM260-203ENST00000539559 ELOA3BQ3SY89 546 aa18.39■□□□□ 0.53
TMEM260-203ENST00000539559 ALG10Q5BKT4 473 aa18.39■□□□□ 0.53
TMEM260-203ENST00000539559 SLC6A19Q695T7 634 aa18.39■□□□□ 0.53
TMEM260-203ENST00000539559 LRRN1Q6UXK5 716 aa18.39■□□□□ 0.53
TMEM260-203ENST00000539559 FAM122BQ7Z309 247 aa18.39■□□□□ 0.53
TMEM260-203ENST00000539559 NAXDQ8IW45 347 aa18.39■□□□□ 0.53
TMEM260-203ENST00000539559 ELOA3Q8NG57 546 aa18.39■□□□□ 0.53
TMEM260-203ENST00000539559 OR10K1Q8NGX5 313 aa18.39■□□□□ 0.53
TMEM260-203ENST00000539559 VSTM2LQ96N03 204 aa18.39■□□□□ 0.53
TMEM260-203ENST00000539559 LRFN5Q96NI6 719 aa18.39■□□□□ 0.53
TMEM260-203ENST00000539559 POLE3Q9NRF9 147 aa18.39■□□□□ 0.53
TMEM260-203ENST00000539559 A0A0A6YYC8 382 aaPredicted RBP18.38■□□□□ 0.53
TMEM260-203ENST00000539559 I3L1I5 382 aaPredicted RBP18.38■□□□□ 0.53
TMEM260-203ENST00000539559 PLRG1O43660 514 aaKnown RBP18.38■□□□□ 0.53
TMEM260-203ENST00000539559 LDOC1O95751 146 aaPredicted RBP18.38■□□□□ 0.53
TMEM260-203ENST00000539559 MAPK3P27361 379 aaPredicted RBP18.38■□□□□ 0.53
TMEM260-203ENST00000539559 GRK6P43250 576 aa18.38■□□□□ 0.53
TMEM260-203ENST00000539559 ARHGAP40Q5TG30 622 aa18.38■□□□□ 0.53
TMEM260-203ENST00000539559 ANKRD16Q6P6B7 361 aa18.38■□□□□ 0.53
TMEM260-203ENST00000539559 DNM1P46Q6ZS02 220 aa18.38■□□□□ 0.53
TMEM260-203ENST00000539559 NARS2Q96I59 477 aaKnown RBP18.38■□□□□ 0.53
TMEM260-203ENST00000539559 ZNF75AQ96N20 296 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms