RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 IL5RAQ01344 420 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 CDK5R2Q13319 367 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 CAMK2DQ13557 499 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 GINS1Q14691 196 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 MESTQ5EB52 335 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 C6orf141Q5SZD1 244 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 SLX4IPQ5VYV7 408 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 FBXW9Q5XUX1 488 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 LRFN4Q6PJG9 635 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 SEZ6L2Q6UXD5 910 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 Q6ZT83 130 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 CXorf67Q86X51 503 aaPredicted RBP11.44□□□□□ -0.58
CCDC42-202ENST00000539522 OR4Q3Q8NH05 313 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 OR6X1Q8NH79 312 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 RHOXF1Q8NHV9 184 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 TEX47Q8TBZ9 253 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 FBLIM1Q8WUP2 373 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 TMEM54Q969K7 222 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 APH1AQ96BI3 265 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 Q96M85 177 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 RBM24Q9BX46 236 aaKnown RBP11.44□□□□□ -0.58
CCDC42-202ENST00000539522 TXNIPQ9H3M7 391 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 NELFAQ9H3P2 528 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 SLC25A19Q9HC21 320 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 KCNJ16Q9NPI9 418 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 MYRFQ9Y2G1 1151 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 CDH10Q9Y6N8 788 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 PRR14LQ5THK1 2151 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 PTPN13Q12923 2485 aa11.44□□□□□ -0.58
CCDC42-202ENST00000539522 BHLHE40O14503 412 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 TRMUO75648 421 aaKnown RBP11.43□□□□□ -0.58
CCDC42-202ENST00000539522 NDUFB2O95178 105 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 OR6A2O95222 327 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 SOX14O95416 240 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 CD14P08571 375 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 PRPS1P60891 318 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 CXCR4P61073 352 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 MYBPC1Q00872 1141 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 CD47Q08722 323 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 C1DQ13901 141 aaKnown RBP11.43□□□□□ -0.58
CCDC42-202ENST00000539522 RBM48Q5RL73 367 aaKnown RBP11.43□□□□□ -0.58
CCDC42-202ENST00000539522 TMEM236Q5W0B7 351 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 CARD17Q5XLA6 110 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 C12orf73Q69YU5 71 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 SLC27A4Q6P1M0 643 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 SMARCD3Q6STE5 483 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 PTCHD4Q6ZW05 846 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 ZNF786Q8N393 782 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 FANK1Q8TC84 345 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 RNASE6Q93091 150 aaKnown RBP11.43□□□□□ -0.58
CCDC42-202ENST00000539522 RASD2Q96D21 266 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 ALKBH3Q96Q83 286 aaPredicted RBP11.43□□□□□ -0.58
CCDC42-202ENST00000539522 KCNK17Q96T54 332 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 DDOQ99489 341 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 TSSK6Q9BXA6 273 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 LINC00470Q9BZP3 86 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 SLCO5A1Q9H2Y9 848 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 IMPAD1Q9NX62 359 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 PCDHGB5Q9Y5G0 923 aa11.43□□□□□ -0.58
CCDC42-202ENST00000539522 KLF2Q9Y5W3 355 aaPredicted RBP11.43□□□□□ -0.58
CCDC42-202ENST00000539522 BAHCC1Q9P281 2608 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 RPL36A-HNRNPH2H7BZ11 118 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 H7C1C5 153 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 PPP1R3DO95685 299 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 TXNDC12O95881 172 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 THBDP07204 575 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 UGT2B10P36537 528 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 CD79BP40259 229 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 CDKN2AP42771 156 aaKnown RBP11.42□□□□□ -0.58
CCDC42-202ENST00000539522 PCYT1AP49585 367 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 ZNF133P52736 654 aaPredicted RBP11.42□□□□□ -0.58
CCDC42-202ENST00000539522 RPL27P61353 136 aaKnown RBP11.42□□□□□ -0.58
CCDC42-202ENST00000539522 SNRPGP62308 76 aaKnown RBP11.42□□□□□ -0.58
CCDC42-202ENST00000539522 LCN6P62502 163 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 TEKQ02763 1124 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 FMODQ06828 376 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 FAPQ12884 760 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 MAD2L1BPQ15013 274 aaPredicted RBP11.42□□□□□ -0.58
CCDC42-202ENST00000539522 SFRP5Q5T4F7 317 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 C9orf135Q5VTT2 229 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 ACSM5Q6NUN0 579 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 ZNF100Q8IYN0 542 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 ZNF433Q8N7K0 673 aaPredicted RBP11.42□□□□□ -0.58
CCDC42-202ENST00000539522 OR52L1Q8NGH7 329 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 FAM81AQ8TBF8 368 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 SLC25A44Q96H78 314 aaPredicted RBP11.42□□□□□ -0.58
CCDC42-202ENST00000539522 Q96MT0 163 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 SLC38A2Q96QD8 506 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 PRRG3Q9BZD7 231 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 ZNF696Q9H7X3 374 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 GPR35Q9HC97 309 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 BAIAP2Q9UQB8 552 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 UGT2A1Q9Y4X1 527 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 IER3IP1Q9Y5U9 82 aa11.42□□□□□ -0.58
CCDC42-202ENST00000539522 TEX13CA0A0J9YWL9 993 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 ZNF503-AS2A6NEH8 195 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 M0R3G1 203 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 LYZL6O75951 148 aa11.41□□□□□ -0.58
CCDC42-202ENST00000539522 CNOT4O95628 575 aaKnown RBP11.41□□□□□ -0.58
CCDC42-202ENST00000539522 BCL10O95999 233 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms