RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 CORINQ9Y5Q5 1042 aa10.99□□□□□ -0.65
CLSTN3-208ENST00000538933 PRKDCP78527 4128 aaKnown RBP10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 TRAV27A0A087WT01 109 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 A0A0J9YW62 118 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 LIPT2A6NK58 231 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 BLOC1S5-TXNDC5H3BN57 136 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 CXCL13O43927 109 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 SSX4O60224 188 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 LMX1BO60663 402 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 EIF1BO60739 113 aaKnown RBP10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 NPIPB7O75200 414 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 PMS2P2O95744 297 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 BGLAPP02818 100 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 IGHV4-31P0DP07 118 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 AHCYP23526 432 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 POU1F1P28069 291 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 RPL4P36578 427 aaKnown RBP10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 DAPP51397 102 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 CLDN20P56880 219 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 ANKDD1AQ495B1 522 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 ZBED5Q49AG3 693 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 CYB5R2Q6BCY4 276 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 ZNF770Q6IQ21 691 aaPredicted RBP10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 FAHD1Q6P587 224 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 IL17RELQ6ZVW7 336 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 FAM214BQ7L5A3 538 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 ZNF555Q8NEP9 628 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 OR5J2Q8NH18 312 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 OR10D3Q8NH80 312 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 FNDC9Q8TBE3 224 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 NRG4Q8WWG1 115 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 OSTF1Q92882 214 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 CPNE4Q96A23 557 aaPredicted RBP10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 C1orf159Q96HA4 380 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 MOGAT1Q96PD6 335 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 SLC29A1Q99808 456 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 PTDSS2Q9BVG9 487 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 TEX12Q9BXU0 123 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 GRIP2Q9C0E4 1043 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 BARX1Q9HBU1 254 aaPredicted RBP10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 SMPD3Q9NY59 655 aaPredicted RBP10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 MCTS1Q9ULC4 181 aaKnown RBP10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 TRAPPC4Q9Y296 219 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 RNF115Q9Y4L5 304 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 NOTCH1P46531 2555 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 NBEAL2Q6ZNJ1 2754 aa10.98□□□□□ -0.65
CLSTN3-208ENST00000538933 SLC35F4A4IF30 521 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 M0R082 166 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 CDC42EP2O14613 210 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 AKR7A3O95154 331 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 SOX14O95416 240 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 ALPLP05186 524 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 ADORA3P0DMS8 318 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 IMPDH2P12268 514 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 OSMP13725 252 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 ENPP1P22413 925 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 GSSP48637 474 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 RAC3P60763 192 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 PRPS1P60891 318 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 FAPQ12884 760 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 ZIK1Q3SY52 487 aaPredicted RBP10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 ZNF672Q499Z4 452 aaPredicted RBP10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 FAM120AOSQ5T036 256 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 NCMAPQ5T1S8 102 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 LIPNQ5VXI9 398 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 KDM4DQ6B0I6 523 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 TMEM225Q6GV28 225 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 KLHL17Q6TDP4 642 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 IZUMO2Q6UXV1 221 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 RASSF6Q6ZTQ3 369 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 SLC46A3Q7Z3Q1 461 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 GGNQ86UU5 652 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 LRRC17Q8N6Y2 441 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 ZNF417Q8TAU3 575 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 ZNF587Q96SQ5 575 aaPredicted RBP10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 ACTR6Q9GZN1 396 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 OR10A4Q9H209 315 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 ZNF175Q9Y473 711 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 CDH10Q9Y6N8 788 aa10.97□□□□□ -0.65
CLSTN3-208ENST00000538933 C11orf98E9PRG8 122 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 RNF13O43567 381 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 DNPH1O43598 174 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 MITFO75030 526 aaPredicted RBP10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 SERPINI2O75830 405 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 AQP8O94778 261 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 NDUFB2O95178 105 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 ZNF16P17020 682 aaPredicted RBP10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 SLC6A6P31641 620 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 HSPA13P48723 471 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 ESRRGP62508 458 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 C1DQ13901 141 aaKnown RBP10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 SLC36A3Q495N2 470 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 ALG10Q5BKT4 473 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 SMARCD3Q6STE5 483 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 PAQR6Q6TCH4 344 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 SEZ6L2Q6UXD5 910 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 CD300LDQ6UXZ3 194 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 H1FNTQ75WM6 255 aaPredicted RBP10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 GPAT4Q86UL3 456 aa10.96□□□□□ -0.65
CLSTN3-208ENST00000538933 DTX2Q86UW9 622 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms