RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 SLC25A38Q96DW6 304 aa8.35□□□□□ -1.07
DDB1-211ENST00000538280 CLIP3Q96DZ5 547 aa8.35□□□□□ -1.07
DDB1-211ENST00000538280 ADAD1Q96M93 576 aaKnown RBP8.35□□□□□ -1.07
DDB1-211ENST00000538280 TSSK2Q96PF2 358 aa8.35□□□□□ -1.07
DDB1-211ENST00000538280 GAL3ST4Q96RP7 486 aa8.35□□□□□ -1.07
DDB1-211ENST00000538280 YIPF2Q9BWQ6 316 aa8.35□□□□□ -1.07
DDB1-211ENST00000538280 NRSN2Q9GZP1 204 aa8.35□□□□□ -1.07
DDB1-211ENST00000538280 DPAGT1Q9H3H5 408 aa8.35□□□□□ -1.07
DDB1-211ENST00000538280 GHITMQ9H3K2 345 aa8.35□□□□□ -1.07
DDB1-211ENST00000538280 SLA2Q9H6Q3 261 aa8.35□□□□□ -1.07
DDB1-211ENST00000538280 GALNT9Q9HCQ5 603 aa8.35□□□□□ -1.07
DDB1-211ENST00000538280 SLC22A11Q9NSA0 550 aa8.35□□□□□ -1.07
DDB1-211ENST00000538280 VSX1Q9NZR4 365 aaPredicted RBP8.35□□□□□ -1.07
DDB1-211ENST00000538280 FRRS1LQ9P0K9 344 aa8.35□□□□□ -1.07
DDB1-211ENST00000538280 GRHPRQ9UBQ7 328 aa8.35□□□□□ -1.07
DDB1-211ENST00000538280 COPS7AQ9UBW8 275 aa8.35□□□□□ -1.07
DDB1-211ENST00000538280 SRPK3Q9UPE1 567 aa8.35□□□□□ -1.07
DDB1-211ENST00000538280 RAXQ9Y2V3 346 aa8.35□□□□□ -1.07
DDB1-211ENST00000538280 RBMX2Q9Y388 322 aaKnown RBP8.35□□□□□ -1.07
DDB1-211ENST00000538280 TMEM14AQ9Y6G1 99 aa8.35□□□□□ -1.07
DDB1-211ENST00000538280 GOLGA4Q13439 2230 aaKnown RBP8.35□□□□□ -1.07
DDB1-211ENST00000538280 TMED7-TICAM2A0A0A6YYA0 188 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 A0A0B4J203 849 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 A0A1B0GVT2 93 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 A0A1W2PPK0 400 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 ACOD1A6NK06 481 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 TTLL8A6PVC2 850 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 A8MVM7 634 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 FAM171A2A8MVW0 826 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 ETV2O00321 342 aaPredicted RBP8.34□□□□□ -1.07
DDB1-211ENST00000538280 BCAT2O15382 392 aaPredicted RBP8.34□□□□□ -1.07
DDB1-211ENST00000538280 HCRTR2O43614 444 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 SULT1B1O43704 296 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 SCO2O43819 266 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 RAF1P04049 648 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 HIST1H2ABP04908 130 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 ANKRD34CP0C6C1 535 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 CXCR1P25024 350 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 ABCD3P28288 659 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 EVI2BP34910 448 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 PPM1FP49593 454 aaPredicted RBP8.34□□□□□ -1.07
DDB1-211ENST00000538280 CCR9P51686 369 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 AFF3P51826 1226 aaKnown RBP8.34□□□□□ -1.07
DDB1-211ENST00000538280 BLVRAP53004 296 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 RPL27P61353 136 aaKnown RBP8.34□□□□□ -1.07
DDB1-211ENST00000538280 DGCR2P98153 550 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 CD83Q01151 205 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 NSDHLQ15738 373 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 NTRK2Q16620 822 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 WDR45BQ5MNZ6 344 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 LIPNQ5VXI9 398 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 DNM1P46Q6ZS02 220 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 ASB18Q6ZVZ8 466 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 HIST3H2AQ7L7L0 130 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 GRINAQ7Z429 371 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 RABEPKQ7Z6M1 372 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 CDH24Q86UP0 819 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 ADGRG3Q86Y34 549 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 PLCZ1Q86YW0 608 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 SIAH3Q8IW03 269 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 NAXDQ8IW45 347 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 CMTM4Q8IZR5 234 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 EID2Q8N6I1 236 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 YIPF7Q8N8F6 280 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 ASCC1Q8N9N2 400 aaKnown RBP8.34□□□□□ -1.07
DDB1-211ENST00000538280 NFAM1Q8NET5 270 aaPredicted RBP8.34□□□□□ -1.07
DDB1-211ENST00000538280 ZFAND1Q8TCF1 268 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 AKAP1Q92667 903 aaKnown RBP eCLIP8.34□□□□□ -1.07
DDB1-211ENST00000538280 THRSPQ92748 146 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 HIST1H2ACQ93077 130 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 C4orf45Q96LM5 186 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 OR8B4Q96RC9 309 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 INTS14Q96SY0 518 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 DPYSL5Q9BPU6 564 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 TBL1XR1Q9BZK7 514 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 BRD7Q9NPI1 651 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 FGF21Q9NSA1 209 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 COPZ2Q9P299 210 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 TEKT2Q9UIF3 430 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 B9D1Q9UPM9 204 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 TMED7Q9Y3B3 224 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 ETV7Q9Y603 341 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 V9GY05 133 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 FER1L5A0AVI2 2057 aa8.34□□□□□ -1.07
DDB1-211ENST00000538280 ACACAQ13085 2346 aa8.34□□□□□ -1.08
DDB1-211ENST00000538280 A0A087WV48 116 aa8.33□□□□□ -1.08
DDB1-211ENST00000538280 IGLV1-36A0A0B4J1U3 117 aa8.33□□□□□ -1.08
DDB1-211ENST00000538280 A0A1B0GVC2 190 aa8.33□□□□□ -1.08
DDB1-211ENST00000538280 CDC14CA4D256 554 aa8.33□□□□□ -1.08
DDB1-211ENST00000538280 ANKUB1A6NFN9 424 aa8.33□□□□□ -1.08
DDB1-211ENST00000538280 TVP23AA6NH52 213 aa8.33□□□□□ -1.08
DDB1-211ENST00000538280 A6NIN4 97 aa8.33□□□□□ -1.08
DDB1-211ENST00000538280 NPIPB13A6NJU9 1138 aa8.33□□□□□ -1.08
DDB1-211ENST00000538280 TMEM212A6NML5 194 aa8.33□□□□□ -1.08
DDB1-211ENST00000538280 C17orf51A8MQB3 221 aa8.33□□□□□ -1.08
DDB1-211ENST00000538280 NPIPB4C9JG80 1138 aa8.33□□□□□ -1.08
DDB1-211ENST00000538280 FAM47E-STBD1D6RA91 191 aa8.33□□□□□ -1.08
DDB1-211ENST00000538280 FTCDNL1E5RQL4 147 aa8.33□□□□□ -1.08
DDB1-211ENST00000538280 H7C1C5 153 aa8.33□□□□□ -1.08
DDB1-211ENST00000538280 SUSD5O60279 629 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 225.9 ms