RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 PTHLHP12272 177 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 RAD52P43351 418 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 C17orf82Q86X59 251 aaPredicted RBP14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 GLB1L2Q8IW92 636 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 CCDC28AQ8IWP9 274 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 SIX5Q8N196 739 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 UXS1Q8NBZ7 420 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 PIGKQ92643 395 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 MVB12AQ96EY5 273 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 KLHDC3Q9BQ90 382 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 RTN4RQ9BZR6 473 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 TAS2R8Q9NYW2 309 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 H7C417 338 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 MT-ATP6P00846 226 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 FAUP35544 74 aaKnown RBP14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 OR1D4P47884 311 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 CENPAP49450 140 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 PUDPQ08623 228 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 DMWDQ09019 674 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 ELAVL1Q15717 326 aaKnown RBP14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 ANKRD16Q6P6B7 361 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 MAMDC2Q7Z304 686 aaPredicted RBP14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 OR51A4Q8NGJ6 313 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 ASB17Q8WXJ9 295 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 C4orf45Q96LM5 186 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 MTFP1Q9UDX5 166 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 PCDHGA5Q9Y5G8 931 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 PCDH15Q96QU1 1955 aa14.5□□□□□ -0.09
CHMP1A-202ENST00000535997 RP1P56715 2156 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 ALG1L2C9J202 215 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 NDUFB5O43674 189 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 CREBL2O60519 120 aaPredicted RBP14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 TOXO94900 526 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 MPC2O95563 127 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 C4BPBP20851 252 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 IL12BP29460 328 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 SSTR2P30874 369 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 RPS27P42677 84 aaKnown RBP14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 GRK1Q15835 563 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 SYT13Q7L8C5 426 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 PRR22Q8IZ63 422 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 FTMTQ8N4E7 242 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 FAM160A2Q8N612 972 aaPredicted RBP14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 OR10AC1Q8NH08 325 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 METTL21AQ8WXB1 218 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 RLN3Q8WXF3 142 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 TSLPQ969D9 159 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 GAL3ST4Q96RP7 486 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 B9D1Q9UPM9 204 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 H3BMH7 237 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 SLC25A12O75746 678 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 OR2A4O95047 310 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 CRYZL1O95825 349 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 GIPP09681 153 aaPredicted RBP14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 ATXN8OSP0DMR3 200 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 TMIGD3P0DMS9 266 aaPredicted RBP14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 PGCP20142 388 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 CD38P28907 300 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 AP2S1P53680 142 aaPredicted RBP14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 ARPC4P59998 168 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 SLC17A1Q14916 467 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 TOMM34Q15785 309 aaPredicted RBP14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 SGCBQ16585 318 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 TEX30Q5JUR7 227 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 CLLU1Q5K131 121 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 C1QL3Q5VWW1 255 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 HLA-DQA1Q5Y7H0 255 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 ZNF626Q68DY1 528 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 ZNF679Q8IYX0 411 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 MSANTD3Q96H12 275 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 OR2A7Q96R45 310 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 OR8B4Q96RC9 309 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 ELF4Q99607 663 aaPredicted RBP14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 SEC22CQ9BRL7 303 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 NUDT9Q9BW91 350 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 MGAT4CQ9UBM8 478 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 UBQLN2Q9UHD9 624 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 KCNG2Q9UJ96 466 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 NUP210LQ5VU65 1888 aa14.49□□□□□ -0.09
CHMP1A-202ENST00000535997 PRSS37A4D1T9 235 aa14.48□□□□□ -0.09
CHMP1A-202ENST00000535997 C2CD4DB7Z1M9 353 aa14.48□□□□□ -0.09
CHMP1A-202ENST00000535997 TO15178 435 aa14.48□□□□□ -0.09
CHMP1A-202ENST00000535997 SHOXO15266 292 aa14.48□□□□□ -0.09
CHMP1A-202ENST00000535997 TSPAN2O60636 221 aa14.48□□□□□ -0.09
CHMP1A-202ENST00000535997 ZNF217O75362 1048 aa14.48□□□□□ -0.09
CHMP1A-202ENST00000535997 ALDOBP05062 364 aa14.48□□□□□ -0.09
CHMP1A-202ENST00000535997 KIR3DL2P43630 455 aa14.48□□□□□ -0.09
CHMP1A-202ENST00000535997 EXOSC2Q13868 293 aaKnown RBP14.48□□□□□ -0.09
CHMP1A-202ENST00000535997 EBPQ15125 230 aaKnown RBP14.48□□□□□ -0.09
CHMP1A-202ENST00000535997 MEP1BQ16820 701 aa14.48□□□□□ -0.09
CHMP1A-202ENST00000535997 WDR38Q5JTN6 314 aa14.48□□□□□ -0.09
CHMP1A-202ENST00000535997 FAAP20Q6NZ36 180 aa14.48□□□□□ -0.09
CHMP1A-202ENST00000535997 MARCH3Q86UD3 253 aa14.48□□□□□ -0.09
CHMP1A-202ENST00000535997 CEP76Q8TAP6 659 aa14.48□□□□□ -0.09
CHMP1A-202ENST00000535997 AMELYQ99218 206 aa14.48□□□□□ -0.09
CHMP1A-202ENST00000535997 ULBP3Q9BZM4 244 aa14.48□□□□□ -0.09
CHMP1A-202ENST00000535997 ELOVL3Q9HB03 270 aa14.48□□□□□ -0.09
CHMP1A-202ENST00000535997 GLTPQ9NZD2 209 aa14.48□□□□□ -0.09
CHMP1A-202ENST00000535997 PIPOXQ9P0Z9 390 aa14.48□□□□□ -0.09
CHMP1A-202ENST00000535997 ZNF69Q9UC07 566 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms