RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 PTGFRP43088 359 aa16.33■□□□□ 0.21
RAB40C-203ENST00000535977 PPP1CAP62136 330 aa16.33■□□□□ 0.21
RAB40C-203ENST00000535977 PON3Q15166 354 aa16.33■□□□□ 0.21
RAB40C-203ENST00000535977 PNPLA2Q96AD5 504 aa16.33■□□□□ 0.21
RAB40C-203ENST00000535977 ORAI3Q9BRQ5 295 aa16.33■□□□□ 0.21
RAB40C-203ENST00000535977 UCK1Q9HA47 277 aa16.33■□□□□ 0.21
RAB40C-203ENST00000535977 A0A0A6YYC8 382 aaPredicted RBP16.33■□□□□ 0.2
RAB40C-203ENST00000535977 SERINC4A6NH21 518 aa16.33■□□□□ 0.2
RAB40C-203ENST00000535977 I3L1I5 382 aaPredicted RBP16.33■□□□□ 0.2
RAB40C-203ENST00000535977 ARPC3O15145 178 aa16.33■□□□□ 0.2
RAB40C-203ENST00000535977 CREBL2O60519 120 aaPredicted RBP16.33■□□□□ 0.2
RAB40C-203ENST00000535977 SNRPEP62304 92 aaKnown RBP16.33■□□□□ 0.2
RAB40C-203ENST00000535977 FUT7Q11130 342 aa16.33■□□□□ 0.2
RAB40C-203ENST00000535977 CCINQ13939 588 aa16.33■□□□□ 0.2
RAB40C-203ENST00000535977 RBMS2Q15434 407 aaKnown RBP16.33■□□□□ 0.2
RAB40C-203ENST00000535977 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.33■□□□□ 0.2
RAB40C-203ENST00000535977 FAM69AQ5T7M9 428 aa16.33■□□□□ 0.2
RAB40C-203ENST00000535977 FCRLBQ6BAA4 426 aa16.33■□□□□ 0.2
RAB40C-203ENST00000535977 OR6V1Q8N148 313 aa16.33■□□□□ 0.2
RAB40C-203ENST00000535977 KLHDC7BQ96G42 594 aa16.33■□□□□ 0.2
RAB40C-203ENST00000535977 NOX3Q9HBY0 568 aa16.33■□□□□ 0.2
RAB40C-203ENST00000535977 ABRACLQ9P1F3 81 aa16.33■□□□□ 0.2
RAB40C-203ENST00000535977 PRODH2Q9UF12 536 aa16.33■□□□□ 0.2
RAB40C-203ENST00000535977 OPN4Q9UHM6 478 aa16.33■□□□□ 0.2
RAB40C-203ENST00000535977 ZNF337Q9Y3M9 751 aa16.33■□□□□ 0.2
RAB40C-203ENST00000535977 VCANP13611 3396 aa16.33■□□□□ 0.2
RAB40C-203ENST00000535977 ANKRD61A6NGH8 418 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 SULT1C2O00338 296 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 AKR7A3O95154 331 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 CSTAP01040 98 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 CELA2BP08218 269 aaPredicted RBP16.32■□□□□ 0.2
RAB40C-203ENST00000535977 CLUP10909 449 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 CBR1P16152 277 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 GPR3P46089 330 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 HSD17B7P56937 341 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 PRPS1P60891 318 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 IL10RAQ13651 578 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 SNTB1Q13884 538 aaKnown RBP16.32■□□□□ 0.2
RAB40C-203ENST00000535977 AVPI1Q5T686 147 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 KIRREL2Q6UWL6 708 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 PARGQ86W56 976 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 SHISA5Q8N114 240 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 TMEM185AQ8NFB2 350 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 OR4N2Q8NGD1 307 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 SMIM4Q8WVI0 70 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 GHSRQ92847 366 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 GCDHQ92947 438 aaPredicted RBP16.32■□□□□ 0.2
RAB40C-203ENST00000535977 WNT2BQ93097 391 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 ST6GALNAC2Q9UJ37 374 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 SYNDIG1LA6NDD5 238 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 HCRTR1O43613 425 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 FOXS1O43638 330 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 GSTZ1O43708 216 aaPredicted RBP16.32■□□□□ 0.2
RAB40C-203ENST00000535977 TMEM127O75204 238 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 HTR3BO95264 441 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 HIST1H1CP16403 213 aaKnown RBP16.32■□□□□ 0.2
RAB40C-203ENST00000535977 SSTP61278 116 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 Q3ZCU0 254 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 ZNF542PQ5EBM4 170 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 ZNF626Q68DY1 528 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 RPL22L1Q6P5R6 122 aaKnown RBP16.32■□□□□ 0.2
RAB40C-203ENST00000535977 SVBPQ8N300 66 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 OR52B4Q8NGK2 314 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 OR5M1Q8NGP8 315 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 ORAI1Q96D31 301 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 SMIM19Q96E16 107 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 PEX11GQ96HA9 241 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 SMAD5Q99717 465 aaKnown RBP16.32■□□□□ 0.2
RAB40C-203ENST00000535977 GINS4Q9BRT9 223 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 OR51M1Q9H341 326 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 OR10H1Q9Y4A9 318 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 IER3IP1Q9Y5U9 82 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 A0A0C4DFX4 3053 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 MPGP29372 298 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 DIO1P49895 249 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 DEFB110Q30KQ9 67 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 SLC6A19Q695T7 634 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 DHRS7BQ6IAN0 325 aaPredicted RBP16.32■□□□□ 0.2
RAB40C-203ENST00000535977 BAIAP2L2Q6UXY1 529 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 NPSR1Q6W5P4 371 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 ZNF761Q86XN6 746 aaPredicted RBP16.32■□□□□ 0.2
RAB40C-203ENST00000535977 C17orf47Q8NEP4 570 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 OR6K3Q8NGY3 331 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 THEM6Q8WUY1 208 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 SGK3Q96BR1 496 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 RASL12Q9NYN1 266 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 CAMK2AQ9UQM7 478 aa16.32■□□□□ 0.2
RAB40C-203ENST00000535977 ST8SIA5O15466 376 aa16.31■□□□□ 0.2
RAB40C-203ENST00000535977 ACVR1BP36896 505 aa16.31■□□□□ 0.2
RAB40C-203ENST00000535977 ADH7P40394 386 aa16.31■□□□□ 0.2
RAB40C-203ENST00000535977 H2BFSP57053 126 aa16.31■□□□□ 0.2
RAB40C-203ENST00000535977 SIRPAP78324 504 aa16.31■□□□□ 0.2
RAB40C-203ENST00000535977 C2orf68Q2NKX9 166 aa16.31■□□□□ 0.2
RAB40C-203ENST00000535977 OR7E24Q6IFN5 339 aa16.31■□□□□ 0.2
RAB40C-203ENST00000535977 SFTPA2Q8IWL1 248 aa16.31■□□□□ 0.2
RAB40C-203ENST00000535977 SLC35F2Q8IXU6 374 aa16.31■□□□□ 0.2
RAB40C-203ENST00000535977 RXFP4Q8TDU9 374 aa16.31■□□□□ 0.2
RAB40C-203ENST00000535977 CMTM3Q96MX0 182 aa16.31■□□□□ 0.2
RAB40C-203ENST00000535977 ZNF285Q96NJ3 590 aa16.31■□□□□ 0.2
RAB40C-203ENST00000535977 OR10A5Q9H207 317 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms