RNA–Protein interactions for RNA: ENST00000534375.1

PICALM-222, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 2

Gene PICALM, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-222	ENST00000534375	PPP1R27	Q86WC6	154 aa		3.09	□□□□□ -1.91
PICALM-222	ENST00000534375	HIPK1	Q86Z02	1210 aa		3.09	□□□□□ -1.91
PICALM-222	ENST00000534375	RBM45	Q8IUH3	476 aa	Known RBP	3.09	□□□□□ -1.91
PICALM-222	ENST00000534375	CD302	Q8IX05	232 aa		3.09	□□□□□ -1.91
PICALM-222	ENST00000534375	FNDC5	Q8NAU1	212 aa		3.09	□□□□□ -1.91
PICALM-222	ENST00000534375	BAALC	Q8WXS3	180 aa		3.09	□□□□□ -1.91
PICALM-222	ENST00000534375	TFG	Q92734	400 aa	Predicted RBP	3.09	□□□□□ -1.91
PICALM-222	ENST00000534375	NRBF2	Q96F24	287 aa		3.09	□□□□□ -1.91
PICALM-222	ENST00000534375	MED8	Q96G25	268 aa		3.09	□□□□□ -1.91
PICALM-222	ENST00000534375	CPB2	Q96IY4	423 aa		3.09	□□□□□ -1.91
PICALM-222	ENST00000534375	LLPH	Q9BRT6	129 aa	Known RBP	3.09	□□□□□ -1.91
PICALM-222	ENST00000534375	LRRC61	Q9BV99	259 aa		3.09	□□□□□ -1.91
PICALM-222	ENST00000534375	ZYG11B	Q9C0D3	744 aa		3.09	□□□□□ -1.91
PICALM-222	ENST00000534375	CHRNA10	Q9GZZ6	450 aa		3.09	□□□□□ -1.91
PICALM-222	ENST00000534375	ZNF302	Q9NR11	478 aa		3.09	□□□□□ -1.91
PICALM-222	ENST00000534375	STMN3	Q9NZ72	180 aa		3.09	□□□□□ -1.91
PICALM-222	ENST00000534375	CCDC59	Q9P031	241 aa	Known RBP	3.09	□□□□□ -1.91
PICALM-222	ENST00000534375	DDX19B	Q9UMR2	479 aa		3.09	□□□□□ -1.91
PICALM-222	ENST00000534375	FLVCR2	Q9UPI3	526 aa		3.09	□□□□□ -1.91
PICALM-222	ENST00000534375	POFUT2	Q9Y2G5	429 aa		3.09	□□□□□ -1.91
PICALM-222	ENST00000534375		V9GY05	133 aa		3.09	□□□□□ -1.91
PICALM-222	ENST00000534375	TRAV6	A0A075B6T7	132 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	PRR23A	A6NEV1	266 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	SLC22A20	A6NK97	555 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	PHF1	O43189	567 aa	Predicted RBP	3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	SLC19A2	O60779	497 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	NDUFS6	O75380	124 aa	Known RBP	3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	ETHE1	O95571	254 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	FGFR1OP	O95684	399 aa	Known RBP	3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	ZNF250	P15622	560 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	CCNO	P22674	350 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	SLC2A5	P22732	501 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	BTC	P35070	178 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	GPR1	P46091	355 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	CSNK1A1	P48729	337 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	PLK1	P53350	603 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	ZNF33A	Q06730	810 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	ART3	Q13508	389 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	C18orf21	Q32NC0	220 aa	Predicted RBP	3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	PAN3	Q58A45	887 aa	Known RBP	3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	OR2B11	Q5JQS5	317 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	ZNF343	Q6P1L6	599 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	UNQ9370/PRO34162	Q6UXP9	181 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	CMC1	Q7Z7K0	106 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	PLA2G4D	Q86XP0	818 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	ST13P4	Q8IZP2	240 aa	Predicted RBP	3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	MYOCD	Q8IZQ8	938 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	ARHGAP18	Q8N392	663 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	MDS2	Q8NDY4	140 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	OR4D6	Q8NGJ1	314 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	CXorf40A	Q8TE69	158 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	RASL10A	Q92737	203 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	TMEM54	Q969K7	222 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	VSIG2	Q96IQ7	327 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	OPRPN	Q99935	248 aa	Predicted RBP	3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	KCNS3	Q9BQ31	491 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	PELO	Q9BRX2	385 aa	Known RBP	3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	MAP1LC3C	Q9BXW4	147 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	RANBP3	Q9H6Z4	567 aa	Predicted RBP	3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	LGALS13	Q9UHV8	139 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	ADGRA3	Q8IWK6	1321 aa		3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	CENPJ	Q9HC77	1338 aa	Predicted RBP	3.08	□□□□□ -1.92
PICALM-222	ENST00000534375	IGHV3OR16-13	A0A075B7E8	117 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	IGKV1D-13	A0A0B4J2D9	117 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	ZNF816-ZNF321P	A0A0X1KG74	233 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	PSMB11	A5LHX3	300 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	ZNF726	A6NNF4	738 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	C12orf77	C9JDV5	145 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375		F6UB75	175 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	PLPP1	O14494	284 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	EDIL3	O43854	480 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	BRI3	O95415	125 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	IGKV1-13	P0DP09	117 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	TCN1	P20061	433 aa	Predicted RBP	3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	TNFSF9	P41273	254 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	KIR2DS4	P43632	304 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	RORC	P51449	518 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	CCR8	P51685	355 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	PSMC5	P62195	406 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	IRX1	P78414	480 aa	Predicted RBP	3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	ADARB1	P78563	741 aa	Known RBP	3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	SP4	Q02446	784 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	EGFEM1P	Q0D2K5	195 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	ELAVL2	Q12926	359 aa	Known RBP	3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	TRDN	Q13061	729 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	ASAH1	Q13510	395 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	ZNF726P1	Q15940	193 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	PRR4	Q16378	134 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	KCTD19	Q17RG1	926 aa	Predicted RBP	3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	PGGHG	Q32M88	737 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	C11orf71	Q6IPW1	123 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	GDPD3	Q7L5L3	318 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	ARC	Q7LC44	396 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	PID1	Q7Z2X4	250 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	ZNF571	Q7Z3V5	609 aa	Predicted RBP	3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	SPATA24	Q86W54	205 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	ERO1B	Q86YB8	467 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	CBLN2	Q8IUK8	224 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	ZNF547	Q8IVP9	402 aa		3.07	□□□□□ -1.92
PICALM-222	ENST00000534375	LRRC8A	Q8IWT6	810 aa		3.07	□□□□□ -1.92

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