RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 OXGR1Q96P68 337 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 FOXB1Q99853 325 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 TMEM246Q9BRR3 403 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 C1orf198Q9H425 327 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 REEP4Q9H6H4 257 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 RANBP3Q9H6Z4 567 aaPredicted RBP8.66□□□□□ -1.02
CSDE1-215ENST00000533818 B3GAT2Q9NPZ5 323 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 INPP5EQ9NRR6 644 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 GPATCH2Q9NW75 528 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 ZMAT5Q9UDW3 170 aaKnown RBP8.66□□□□□ -1.02
CSDE1-215ENST00000533818 CGGBP1Q9UFW8 167 aaPredicted RBP8.66□□□□□ -1.02
CSDE1-215ENST00000533818 TIMM22Q9Y584 194 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 TANC2Q9HCD6 1990 aa8.66□□□□□ -1.02
CSDE1-215ENST00000533818 TCRBV9S1A1TA0A576 114 aa8.65□□□□□ -1.02
CSDE1-215ENST00000533818 PRAMEF27A3QJZ7 478 aa8.65□□□□□ -1.02
CSDE1-215ENST00000533818 PHYHO14832 338 aa8.65□□□□□ -1.02
CSDE1-215ENST00000533818 AKAP8O43823 692 aaKnown RBP8.65□□□□□ -1.02
CSDE1-215ENST00000533818 PTHP01270 115 aa8.65□□□□□ -1.02
CSDE1-215ENST00000533818 RBP1P09455 135 aa8.65□□□□□ -1.02
CSDE1-215ENST00000533818 CRATP43155 626 aa8.65□□□□□ -1.02
CSDE1-215ENST00000533818 ETF1P62495 437 aaKnown RBP8.65□□□□□ -1.02
CSDE1-215ENST00000533818 DGCR2P98153 550 aa8.65□□□□□ -1.02
CSDE1-215ENST00000533818 BNIP2Q12982 314 aa8.65□□□□□ -1.02
CSDE1-215ENST00000533818 CHI3L2Q15782 390 aa8.65□□□□□ -1.02
CSDE1-215ENST00000533818 IMPG1Q17R60 797 aa8.65□□□□□ -1.02
CSDE1-215ENST00000533818 VRK2Q86Y07 508 aa8.65□□□□□ -1.02
CSDE1-215ENST00000533818 SCAIQ8N9R8 606 aa8.65□□□□□ -1.02
CSDE1-215ENST00000533818 KLF14Q8TD94 323 aaPredicted RBP8.65□□□□□ -1.02
CSDE1-215ENST00000533818 PYROXD1Q8WU10 500 aa8.65□□□□□ -1.02
CSDE1-215ENST00000533818 C10orf82Q8WW14 230 aa8.65□□□□□ -1.02
CSDE1-215ENST00000533818 CNOT9Q92600 299 aaKnown RBP8.65□□□□□ -1.02
CSDE1-215ENST00000533818 SLC25A36Q96CQ1 311 aa8.65□□□□□ -1.02
CSDE1-215ENST00000533818 CITED4Q96RK1 184 aa8.65□□□□□ -1.02
CSDE1-215ENST00000533818 SIRPDQ9H106 197 aa8.65□□□□□ -1.02
CSDE1-215ENST00000533818 STARD9Q9P2P6 4700 aa8.65□□□□□ -1.03
CSDE1-215ENST00000533818 CLDN24A6NM45 220 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 A8MVM7 634 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 E7ESA3 106 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 NPIPB8E9PQR5 432 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 TBX19O60806 448 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 PAHP00439 452 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 TFPTP0C1Z6 253 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 PNMTP11086 282 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 KCNJ10P78508 379 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 PLAURQ03405 335 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 RUNDC3AQ59EK9 446 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 MROH9Q5TGP6 573 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 C1orf140Q5VVS0 124 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 MBNL2Q5VZF2 373 aaKnown RBP8.64□□□□□ -1.03
CSDE1-215ENST00000533818 CD276Q5ZPR3 534 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 LYPD2Q6UXB3 125 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 UNQ9370/PRO34162Q6UXP9 181 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 PNLDC1Q8NA58 520 aaKnown RBP8.64□□□□□ -1.03
CSDE1-215ENST00000533818 OR2Z1Q8NG97 314 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 VANGL1Q8TAA9 524 aaPredicted RBP8.64□□□□□ -1.03
CSDE1-215ENST00000533818 SLC25A40Q8TBP6 338 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 NPRL2Q8WTW4 380 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 GATAD1Q8WUU5 269 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 ITLN1Q8WWA0 313 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 TFAP2CQ92754 450 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 LRR1Q96L50 414 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 ZNF382Q96SR6 550 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 BAG1Q99933 345 aaPredicted RBP8.64□□□□□ -1.03
CSDE1-215ENST00000533818 MECRQ9BV79 373 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 ULBP2Q9BZM5 246 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 ZNF350Q9GZX5 532 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.64□□□□□ -1.03
CSDE1-215ENST00000533818 SERTAD4Q9NUC0 356 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 B3GAT1Q9P2W7 334 aa8.64□□□□□ -1.03
CSDE1-215ENST00000533818 KIAA1109Q2LD37 5005 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 IQCMA0A1B0GVH7 501 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 IFNL4K9M1U5 179 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 CLIC3O95833 236 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 AK1P00568 194 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 LHBP01229 141 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 ZNF26P17031 533 aaPredicted RBP8.63□□□□□ -1.03
CSDE1-215ENST00000533818 CCNOP22674 350 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 CHATP28329 748 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 ARF6P62330 175 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 RPS26P62854 115 aaKnown RBP8.63□□□□□ -1.03
CSDE1-215ENST00000533818 PLP2Q04941 152 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 LY6EQ16553 131 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 XKR7Q5GH72 579 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 MTX3Q5HYI7 312 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 TMEM53Q6P2H8 277 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 ZNF841Q6ZN19 808 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 C3orf62Q6ZUJ4 267 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 CYS1Q717R9 158 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 HMGN2P46Q86SG4 172 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 MIER2Q8N344 545 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 SLC22A24Q8N4F4 322 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 VPS37AQ8NEZ2 397 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 C8orf46Q8TAG6 207 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 PNPT1Q8TCS8 783 aaKnown RBP8.63□□□□□ -1.03
CSDE1-215ENST00000533818 OIT3Q8WWZ8 545 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 MAGEB18Q96M61 343 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 TECTBQ96PL2 329 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 KCNA7Q96RP8 456 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 DDOQ99489 341 aa8.63□□□□□ -1.03
CSDE1-215ENST00000533818 SH3GL3Q99963 347 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms