RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 DANCRP0C864 163 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 CBR1P16152 277 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 ERVK-25P63136 954 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 MYBPC1Q00872 1141 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 CHRNB3Q05901 458 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 C3orf36Q3SXR2 165 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 ZNF672Q499Z4 452 aaPredicted RBP12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 FAM98BQ52LJ0 330 aaKnown RBP12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 C10orf128Q5T292 105 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 PGBD2Q6P3X8 592 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 SLC25A47Q6Q0C1 308 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 KLHL24Q6TFL4 600 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 TMEM108Q6UXF1 575 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 B3GLCTQ6Y288 498 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 MYPOPQ86VE0 399 aaPredicted RBP12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 SKA3Q8IX90 412 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 ARIH2OSQ8N7S6 290 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 PAPD5Q8NDF8 572 aaKnown RBP12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 NOXO1Q8NFA2 376 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 POP5Q969H6 163 aaKnown RBP12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 SLCO4A1Q96BD0 722 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 RSRC1Q96IZ7 334 aaKnown RBP12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 Q96M85 177 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 FOXB1Q99853 325 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 KATNB1Q9BVA0 655 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 CHID1Q9BWS9 393 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 SEC61A2Q9H9S3 476 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 UBTD1Q9HAC8 227 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 B3GAT2Q9NPZ5 323 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 TMEM38BQ9NVV0 291 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 POFUT2Q9Y2G5 429 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 ADAM18Q9Y3Q7 739 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 MAGED1Q9Y5V3 778 aaPredicted RBP12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 UNC119BA6NIH7 251 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 E7EQL1 145 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 M0R1B8 84 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 TNFRSF11BO00300 401 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 NDUFB2O95178 105 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 WNT11O96014 354 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 CELA3BP08861 270 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 RAP2AP10114 183 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 B4GALT1P15291 398 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 FPR3P25089 353 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 ACVR1BP36896 505 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 FMODQ06828 376 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 PGGHGQ32M88 737 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 OR2T5Q6IEZ7 315 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 KLHL17Q6TDP4 642 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 ZNF813Q6ZN06 617 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 ASRGL1Q7L266 308 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 MDP1Q86V88 176 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 CCDC36Q8IYA8 594 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 OR2T29Q8NH02 315 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 HTRA1Q92743 480 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 FOXC2Q99958 501 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 ALG12Q9BV10 488 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 LRMDAQ9H2I8 198 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 MGAT4BQ9UQ53 548 aa12.13□□□□□ -0.47
TSPAN4-220ENST00000532375 DHRS12A0PJE2 317 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 IMPA2O14732 288 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 OR10H3O60404 316 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 SLC2A10O95528 541 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 TXNDC12O95881 172 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 GASTP01350 101 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 CD8AP01732 235 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 HLA-HP01893 362 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 CECR9P0C854 216 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 PAX7P23759 505 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 DNASE1P24855 282 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 CLRN1P58418 232 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 UBE2NP61088 152 aaKnown RBP12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 TSPAN31Q12999 210 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 TOP3AQ13472 1001 aaPredicted RBP12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 FLOT2Q14254 428 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 DEFB113Q30KQ7 82 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 RFX4Q33E94 735 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 MESTQ5EB52 335 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 C20orf204Q6ZNR8 217 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 FOXL2NBQ6ZUU3 175 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 TMEM179BQ7Z7N9 219 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 KRTAP1-3Q8IUG1 177 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 SLC22A24Q8N4F4 322 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 OR9Q2Q8NGE9 314 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 UTP4Q969X6 686 aaKnown RBP12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 NABP1Q96AH0 204 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 RADILQ96JH8 1075 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 LRGUKQ96M69 825 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 SLC38A2Q96QD8 506 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 SMURF2Q9HAU4 748 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 STX18Q9P2W9 335 aaKnown RBP12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 IL20RAQ9UHF4 553 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 TMCC3Q9ULS5 477 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 AURKCQ9UQB9 309 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 ARFGEF3Q5TH69 2177 aa12.12□□□□□ -0.47
TSPAN4-220ENST00000532375 ZNF469Q96JG9 3925 aaPredicted RBP12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 SLC22A23A1A5C7 686 aa12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 TP53P04637 393 aaPredicted RBP12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 SOD3P08294 240 aa12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 PATE4P0C8F1 98 aa12.11□□□□□ -0.47
TSPAN4-220ENST00000532375 APEHP13798 732 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms