RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 ALDH3B1P43353 468 aa14.46□□□□□ -0.09
CPSF1-207ENST00000531727 TRIP10Q15642 601 aa14.46□□□□□ -0.09
CPSF1-207ENST00000531727 NANOGP8Q6NSW7 305 aa14.46□□□□□ -0.09
CPSF1-207ENST00000531727 NANOGNBQ7Z5D8 188 aa14.46□□□□□ -0.09
CPSF1-207ENST00000531727 LRP11Q86VZ4 500 aa14.46□□□□□ -0.09
CPSF1-207ENST00000531727 LINC01356Q8N9X3 169 aa14.46□□□□□ -0.09
CPSF1-207ENST00000531727 C1orf159Q96HA4 380 aa14.46□□□□□ -0.09
CPSF1-207ENST00000531727 SH3GL3Q99963 347 aa14.46□□□□□ -0.09
CPSF1-207ENST00000531727 VIPAS39Q9H9C1 493 aa14.46□□□□□ -0.09
CPSF1-207ENST00000531727 NANOGQ9H9S0 305 aa14.46□□□□□ -0.09
CPSF1-207ENST00000531727 MEPEQ9NQ76 525 aaPredicted RBP14.46□□□□□ -0.09
CPSF1-207ENST00000531727 MYEF2Q9P2K5 600 aaKnown RBP14.46□□□□□ -0.09
CPSF1-207ENST00000531727 BLOC1S5-TXNDC5H3BN57 136 aa14.45□□□□□ -0.1
CPSF1-207ENST00000531727 FARS2O95363 451 aaKnown RBP14.45□□□□□ -0.1
CPSF1-207ENST00000531727 BCL10O95999 233 aa14.45□□□□□ -0.1
CPSF1-207ENST00000531727 IGHG1P01857 330 aa14.45□□□□□ -0.1
CPSF1-207ENST00000531727 QDPRP09417 244 aa14.45□□□□□ -0.1
CPSF1-207ENST00000531727 CDH15P55291 814 aa14.45□□□□□ -0.1
CPSF1-207ENST00000531727 CYLC2Q14093 348 aaPredicted RBP14.45□□□□□ -0.1
CPSF1-207ENST00000531727 MAD2L1BPQ15013 274 aaPredicted RBP14.45□□□□□ -0.1
CPSF1-207ENST00000531727 ELFN2Q5R3F8 820 aa14.45□□□□□ -0.1
CPSF1-207ENST00000531727 REP15Q6BDI9 236 aa14.45□□□□□ -0.1
CPSF1-207ENST00000531727 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.45□□□□□ -0.13e-9■■■■□ 19.5
CPSF1-207ENST00000531727 UGT2A3Q6UWM9 527 aa14.45□□□□□ -0.1
CPSF1-207ENST00000531727 CALHM3Q86XJ0 350 aa14.45□□□□□ -0.1
CPSF1-207ENST00000531727 SH3GL1Q99961 368 aa14.45□□□□□ -0.1
CPSF1-207ENST00000531727 FZR1Q9UM11 496 aa14.45□□□□□ -0.1
CPSF1-207ENST00000531727 SH3GLB1Q9Y371 365 aa14.45□□□□□ -0.1
CPSF1-207ENST00000531727 SLC22A23A1A5C7 686 aa14.44□□□□□ -0.1
CPSF1-207ENST00000531727 HPXP02790 462 aa14.44□□□□□ -0.1
CPSF1-207ENST00000531727 MT-ND1P03886 318 aa14.44□□□□□ -0.1
CPSF1-207ENST00000531727 TCN1P20061 433 aaPredicted RBP14.44□□□□□ -0.1
CPSF1-207ENST00000531727 RBM34P42696 430 aaKnown RBP14.44□□□□□ -0.1
CPSF1-207ENST00000531727 SEC24CP53992 1094 aa14.44□□□□□ -0.1
CPSF1-207ENST00000531727 CLRN1P58418 232 aa14.44□□□□□ -0.1
CPSF1-207ENST00000531727 HIST3H3Q16695 136 aa14.44□□□□□ -0.1
CPSF1-207ENST00000531727 NRN1LQ496H8 165 aa14.44□□□□□ -0.1
CPSF1-207ENST00000531727 RABL3Q5HYI8 236 aa14.44□□□□□ -0.1
CPSF1-207ENST00000531727 TMEM53Q6P2H8 277 aa14.44□□□□□ -0.1
CPSF1-207ENST00000531727 DPPA2Q7Z7J5 298 aa14.44□□□□□ -0.1
CPSF1-207ENST00000531727 CARM1Q86X55 608 aa14.44□□□□□ -0.1
CPSF1-207ENST00000531727 SLC30A7Q8NEW0 376 aa14.44□□□□□ -0.1
CPSF1-207ENST00000531727 OR4K5Q8NGD3 323 aa14.44□□□□□ -0.1
CPSF1-207ENST00000531727 PFN4Q8NHR9 129 aa14.44□□□□□ -0.1
CPSF1-207ENST00000531727 MCHR2Q969V1 340 aa14.44□□□□□ -0.1
CPSF1-207ENST00000531727 TMEM120AQ9BXJ8 343 aa14.44□□□□□ -0.1
CPSF1-207ENST00000531727 POLR2J2Q9GZM3 115 aaKnown RBP14.44□□□□□ -0.1
CPSF1-207ENST00000531727 POLR2J3Q9H1A7 115 aaKnown RBP14.44□□□□□ -0.1
CPSF1-207ENST00000531727 C1orf198Q9H425 327 aa14.44□□□□□ -0.1
CPSF1-207ENST00000531727 DUSP13Q9UII6 198 aa14.44□□□□□ -0.1
CPSF1-207ENST00000531727 BAG5Q9UL15 447 aa14.44□□□□□ -0.1
CPSF1-207ENST00000531727 ZNF346Q9UL40 294 aaKnown RBP14.44□□□□□ -0.1
CPSF1-207ENST00000531727 STAB1Q9NY15 2570 aa14.44□□□□□ -0.1
CPSF1-207ENST00000531727 A0A1W2PPW3 197 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 A0A1W2PRG6 482 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 CENPBD1B2RD01 187 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 MCIDASD6RGH6 385 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 FXYD1O00168 92 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 OR7A10O76100 309 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 IGF2P01344 180 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 F13BP05160 661 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 TNFRSF1BP20333 461 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 ACHEP22303 614 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 ZNF84P51523 738 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 UGT2B15P54855 530 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 TAS2R41P59536 307 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 RUNX1T1Q06455 604 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 RPL18Q07020 188 aaKnown RBP14.43□□□□□ -0.1
CPSF1-207ENST00000531727 CCNIQ14094 377 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 SLC36A2Q495M3 483 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 RGS7BPQ6MZT1 257 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-207ENST00000531727 SLC16A14Q7RTX9 510 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 HDDC2Q7Z4H3 204 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 NKAIN4Q8IVV8 208 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 PAQR4Q8N4S7 273 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-207ENST00000531727 NOXO1Q8NFA2 376 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 OR8J3Q8NGG0 315 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 TMEM255BQ8WV15 326 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 ASB10Q8WXI3 467 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 RDH5Q92781 318 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 LRRC58Q96CX6 371 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 ZNF347Q96SE7 839 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 SEPHS2Q99611 448 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 ECSITQ9BQ95 431 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 C19orf24Q9BVV8 132 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 MRPL13Q9BYD1 178 aaKnown RBP14.43□□□□□ -0.1
CPSF1-207ENST00000531727 RNF121Q9H920 327 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 MRGBPQ9NV56 204 aa14.43□□□□□ -0.1
CPSF1-207ENST00000531727 TMEFF2Q9UIK5 374 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-207ENST00000531727 ANK2Q01484 3957 aa14.42□□□□□ -0.1
CPSF1-207ENST00000531727 OR5F1O95221 314 aa14.42□□□□□ -0.1
CPSF1-207ENST00000531727 SNAP29O95721 258 aa14.42□□□□□ -0.1
CPSF1-207ENST00000531727 PTHP01270 115 aa14.42□□□□□ -0.1
CPSF1-207ENST00000531727 FAM157BP0CG42 384 aa14.42□□□□□ -0.1
CPSF1-207ENST00000531727 NAT2P11245 290 aa14.42□□□□□ -0.1
CPSF1-207ENST00000531727 CCL2P13500 99 aa14.42□□□□□ -0.1
CPSF1-207ENST00000531727 FUT1P19526 365 aa14.42□□□□□ -0.1
CPSF1-207ENST00000531727 COL8A2P25067 703 aa14.42□□□□□ -0.1
CPSF1-207ENST00000531727 GPR6P46095 362 aaPredicted RBP14.42□□□□□ -0.1
CPSF1-207ENST00000531727 DAP3P51398 398 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms