RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 TSSK6Q9BXA6 273 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 ULBP2Q9BZM5 246 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 CRLF2Q9HC73 371 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 B3GAT2Q9NPZ5 323 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 PAPOLBQ9NRJ5 636 aaKnown RBP12.32□□□□□ -0.44
USF1-209ENST00000529476 TAS2R16Q9NYV7 291 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 STX18Q9P2W9 335 aaKnown RBP12.32□□□□□ -0.44
USF1-209ENST00000529476 GPR52Q9Y2T5 361 aa12.32□□□□□ -0.44
USF1-209ENST00000529476 CENPBD1B2RD01 187 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 RPL36A-HNRNPH2H7BZ11 118 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 XKRYO14609 159 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 ARPC3O15145 178 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 RRP9O43818 475 aaKnown RBP12.31□□□□□ -0.44
USF1-209ENST00000529476 RAD51DO75771 328 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 TXNDC12O95881 172 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 QDPRP09417 244 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 APEHP13798 732 aaKnown RBP12.31□□□□□ -0.44
USF1-209ENST00000529476 IL32P24001 234 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 POU1F1P28069 291 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 PPP2R2BQ00005 443 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 SORDQ00796 357 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 FMODQ06828 376 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 HIST3H3Q16695 136 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 CEACAM16Q2WEN9 425 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 KRTAP21-3Q3LHN1 58 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 SLC35F1Q5T1Q4 408 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 KDM4DQ6B0I6 523 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 SP5Q6BEB4 398 aaPredicted RBP12.31□□□□□ -0.44
USF1-209ENST00000529476 MEX3BQ6ZN04 569 aaKnown RBP12.31□□□□□ -0.44
USF1-209ENST00000529476 IQCF1Q8N6M8 205 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 ACBD4Q8NC06 268 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 LINC01560Q8TB33 94 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 TEX47Q8TBZ9 253 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 DNAJC9Q8WXX5 260 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 MCHR2Q969V1 340 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 S100PBPQ96BU1 408 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 NMD3Q96D46 503 aaKnown RBP12.31□□□□□ -0.44
USF1-209ENST00000529476 ALG12Q9BV10 488 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 OSBPL10Q9BXB5 764 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 HDHD5Q9BXW7 423 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 ACTR6Q9GZN1 396 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 KRT84Q9NSB2 600 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 TMEFF2Q9UIK5 374 aaPredicted RBP12.31□□□□□ -0.44
USF1-209ENST00000529476 POFUT2Q9Y2G5 429 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 ZFHX3Q15911 3703 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 ADGRG4Q8IZF6 3080 aa12.31□□□□□ -0.44
USF1-209ENST00000529476 IGKV1D-43A0A0B4J1Z2 117 aa12.3□□□□□ -0.44
USF1-209ENST00000529476 CIB4A0PJX0 185 aa12.3□□□□□ -0.44
USF1-209ENST00000529476 IMPA2O14732 288 aa12.3□□□□□ -0.44
USF1-209ENST00000529476 SEC14L2O76054 403 aa12.3□□□□□ -0.44
USF1-209ENST00000529476 SLC2A10O95528 541 aa12.3□□□□□ -0.44
USF1-209ENST00000529476 HIST1H1CP16403 213 aaKnown RBP12.3□□□□□ -0.44
USF1-209ENST00000529476 NOS3P29474 1203 aa12.3□□□□□ -0.44
USF1-209ENST00000529476 CDKN2AP42771 156 aaKnown RBP12.3□□□□□ -0.44
USF1-209ENST00000529476 ARF1P84077 181 aaKnown RBP12.3□□□□□ -0.44
USF1-209ENST00000529476 CD47Q08722 323 aa12.3□□□□□ -0.44
USF1-209ENST00000529476 GABRA6Q16445 453 aa12.3□□□□□ -0.44
USF1-209ENST00000529476 C22orf34Q6ZV56 151 aa12.3□□□□□ -0.44
USF1-209ENST00000529476 PTCHD4Q6ZW05 846 aa12.3□□□□□ -0.44
USF1-209ENST00000529476 DMRTC2Q8IXT2 367 aaPredicted RBP12.3□□□□□ -0.44
USF1-209ENST00000529476 PARP8Q8N3A8 854 aa12.3□□□□□ -0.44
USF1-209ENST00000529476 LNX2Q8N448 690 aa12.3□□□□□ -0.44
USF1-209ENST00000529476 CBR4Q8N4T8 237 aa12.3□□□□□ -0.44
USF1-209ENST00000529476 STEAP2Q8NFT2 490 aa12.3□□□□□ -0.44
USF1-209ENST00000529476 OR1K1Q8NGR3 316 aa12.3□□□□□ -0.44
USF1-209ENST00000529476 OR4K13Q8NH42 304 aa12.3□□□□□ -0.44
USF1-209ENST00000529476 MARVELD3Q96A59 401 aa12.3□□□□□ -0.44
USF1-209ENST00000529476 WFIKKN1Q96NZ8 548 aa12.3□□□□□ -0.44
USF1-209ENST00000529476 SLC22A23A1A5C7 686 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 PRSS37A4D1T9 235 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 TUBAL3A6NHL2 446 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 ZNF99A8MXY4 864 aaPredicted RBP12.29□□□□□ -0.44
USF1-209ENST00000529476 H0YHG0 523 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 EI24O14681 340 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 DHHO43323 396 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 IDH3BO43837 385 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 IGFBP5P24593 272 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 CRISP1P54107 249 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 TGFBR3Q03167 851 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 DAG1Q14118 895 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 GINS1Q14691 196 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 STK11Q15831 433 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 PGGHGQ32M88 737 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 SLC27A4Q6P1M0 643 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 ADCK1Q86TW2 530 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 JAZF1Q86VZ6 243 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 SDR9C7Q8NEX9 313 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 OR2T33Q8NG76 320 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 OR52E2Q8NGJ4 325 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 NSMAFQ92636 917 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 MUS81Q96NY9 551 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 RBP7Q96R05 134 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 NMNAT3Q96T66 252 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 SLC29A1Q99808 456 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 RBM4BQ9BQ04 359 aaKnown RBP12.29□□□□□ -0.44
USF1-209ENST00000529476 C9orf16Q9BUW7 83 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 RBM4Q9BWF3 364 aaKnown RBP12.29□□□□□ -0.44
USF1-209ENST00000529476 NELFAQ9H3P2 528 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 BAIAP2Q9UQB8 552 aa12.29□□□□□ -0.44
USF1-209ENST00000529476 APCP25054 2843 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms