RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.02□□□□□ -1.29
SSBP3-211ENST00000528787 CAMK2DQ13557 499 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 LRRC36Q1X8D7 754 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 SLC36A2Q495M3 483 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 CLEC12AQ5QGZ9 265 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 C10orf128Q5T292 105 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 SLX4IPQ5VYV7 408 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 NXNL2Q5VZ03 156 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 LEG1Q6P5S2 330 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 ANKRD16Q6P6B7 361 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 C3P1Q6ZMU1 363 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 PTCHD4Q6ZW05 846 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 FAM122BQ7Z309 247 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 SYT9Q86SS6 491 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 GLB1L2Q8IW92 636 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 HS3ST5Q8IZT8 346 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 C8orf59Q8N0T1 100 aaPredicted RBP7.02□□□□□ -1.29
SSBP3-211ENST00000528787 TMEM123Q8N131 208 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 KDM8Q8N371 416 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 GALNT4Q8N4A0 578 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 LRRC75AQ8NAA5 344 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 OR10H5Q8NGA6 315 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 OR52E2Q8NGJ4 325 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 ZNF519Q8TB69 540 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 SSC4DQ8WTU2 575 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 HSD17B8Q92506 261 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 RNASE6Q93091 150 aaKnown RBP7.02□□□□□ -1.29
SSBP3-211ENST00000528787 TMEM54Q969K7 222 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 STARD4Q96DR4 205 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 DNAJA3Q96EY1 480 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 TSPAN32Q96QS1 320 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 KCNK17Q96T54 332 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 RBM24Q9BX46 236 aaKnown RBP7.02□□□□□ -1.29
SSBP3-211ENST00000528787 MRPL13Q9BYD1 178 aaKnown RBP7.02□□□□□ -1.29
SSBP3-211ENST00000528787 GRIP2Q9C0E4 1043 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 RACGAP1Q9H0H5 632 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 NELFAQ9H3P2 528 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 C12orf49Q9H741 205 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 CLN6Q9NWW5 311 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 MED29Q9NX70 200 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 ZNF226Q9NYT6 803 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 JKAMPQ9P055 326 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 REV1Q9UBZ9 1251 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 RAB26Q9ULW5 256 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 TMEM14AQ9Y6G1 99 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 NBASA2RRP1 2371 aa7.02□□□□□ -1.29
SSBP3-211ENST00000528787 ZFYVE26Q68DK2 2539 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 SLC22A23A1A5C7 686 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 SH3D21A4FU49 640 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 C12orf71A8MTZ7 269 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 PHYHO14832 338 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 CASKO14936 926 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 SURF4O15260 269 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 DHHO43323 396 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 UBL3O95164 117 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 HLA-DQA2P01906 255 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 APOC1P02654 83 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 HRGP04196 525 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 QDPRP09417 244 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 PLA2G2AP14555 144 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 ZNF823P16415 610 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 ZNF26P17031 533 aaPredicted RBP7.01□□□□□ -1.29
SSBP3-211ENST00000528787 FMO3P31513 532 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 GGT2P36268 569 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 ARR3P36575 388 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 CAPGP40121 348 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 CD79BP40259 229 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 CAPZA2P47755 286 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 SELENOPP49908 381 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 LSM6P62312 80 aaKnown RBP7.01□□□□□ -1.29
SSBP3-211ENST00000528787 MRPS34P82930 218 aaKnown RBP7.01□□□□□ -1.29
SSBP3-211ENST00000528787 ROR2Q01974 943 aaKnown RBP7.01□□□□□ -1.29
SSBP3-211ENST00000528787 FAPQ12884 760 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 FHL1Q13642 323 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 HIST3H3Q16695 136 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 TIMM23BQ5SRD1 257 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 SLC25A30Q5SVS4 291 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 SFRP5Q5T4F7 317 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 LPCAT4Q643R3 524 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 SEM1Q6ZVN7 128 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 ZNF627Q7L945 461 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 BTLAQ7Z6A9 289 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 EGFL6Q8IUX8 553 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 C1orf174Q8IYL3 243 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 ALDH16A1Q8IZ83 802 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 ZIC4Q8N9L1 334 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 PROKR2Q8NFJ6 384 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 IL17RDQ8NFM7 739 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 OR2AJ1Q8NGZ0 328 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 HAVCR2Q8TDQ0 301 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 CYGBQ8WWM9 190 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 MCHR2Q969V1 340 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 Q96M85 177 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 ZNF385AQ96PM9 386 aaKnown RBP7.01□□□□□ -1.29
SSBP3-211ENST00000528787 ZNF184Q99676 751 aaPredicted RBP7.01□□□□□ -1.29
SSBP3-211ENST00000528787 PITX2Q99697 317 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 GPA33Q99795 319 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 FOXB1Q99853 325 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 ADI1Q9BV57 179 aa7.01□□□□□ -1.29
SSBP3-211ENST00000528787 CDADC1Q9BWV3 514 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms