RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 SASS6Q6UVJ0 657 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 MOB3BQ86TA1 216 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 ACOT1Q86TX2 421 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 SLC47A2Q86VL8 602 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 RANBP3LQ86VV4 465 aaPredicted RBP4.65□□□□□ -1.67
PCF11-202ENST00000528336 P2RY8Q86VZ1 359 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 STXBP6Q8NFX7 210 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 OR5T1Q8NG75 326 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 NUBPLQ8TB37 319 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 SSC4DQ8WTU2 575 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 UPRTQ96BW1 309 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 SERAC1Q96JX3 654 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 MBOAT4Q96T53 435 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 PARD6GQ9BYG4 376 aaPredicted RBP4.65□□□□□ -1.67
PCF11-202ENST00000528336 ASB8Q9H765 288 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 ZNF665Q9H7R5 613 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 IFNKQ9P0W0 207 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 APOBEC3BQ9UH17 382 aaKnown RBP4.65□□□□□ -1.67
PCF11-202ENST00000528336 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.65□□□□□ -1.67
PCF11-202ENST00000528336 FZR1Q9UM11 496 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 CFL2Q9Y281 166 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 PEX16Q9Y5Y5 336 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 SMAD5-AS1Q9Y6J3 95 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 MYH2Q9UKX2 1941 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 CCDC171Q6TFL3 1326 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 RAD50Q92878 1312 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 SSC5DA1L4H1 1573 aa4.65□□□□□ -1.67
PCF11-202ENST00000528336 SMCO2A6NFE2 343 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 ARHGEF33A8MVX0 844 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 SHISA9B4DS77 424 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 ANHXE9PGG2 379 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 MKRN2OSH3BPM6 223 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 IMPA2O14732 288 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 SIVA1O15304 175 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 EMC8O43402 210 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 SRPX2O60687 465 aaPredicted RBP4.64□□□□□ -1.67
PCF11-202ENST00000528336 SCELO95171 688 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 TMEM50AO95807 157 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 FADS2O95864 444 aaKnown RBP4.64□□□□□ -1.67
PCF11-202ENST00000528336 IGHG3P01860 377 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 CT62P0C5K7 136 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 KITLGP21583 273 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 PRDX3P30048 256 aaKnown RBP4.64□□□□□ -1.67
PCF11-202ENST00000528336 HPCAL1P37235 193 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 BACE1P56817 501 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 OR2B6P58173 313 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 ARPC4P59998 168 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 SRYQ05066 204 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 ZP4Q12836 540 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 ALX1Q15699 326 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 C3AR1Q16581 482 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 SLC22A10Q63ZE4 541 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 CD300LGQ6UXG3 332 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 PLEKHG7Q6ZR37 379 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 TIPARPQ7Z3E1 657 aaKnown RBP4.64□□□□□ -1.67
PCF11-202ENST00000528336 ZNF589Q86UQ0 364 aaPredicted RBP4.64□□□□□ -1.67
PCF11-202ENST00000528336 TMEM17Q86X19 198 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 CATSPER3Q86XQ3 398 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 STX12Q86Y82 276 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 ELMOD1Q8N336 334 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 Q8N9G6 341 aaPredicted RBP4.64□□□□□ -1.67
PCF11-202ENST00000528336 LRRC75AQ8NAA5 344 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 OR4D6Q8NGJ1 314 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 RDH11Q8TC12 318 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 FAM110BQ8TC76 370 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 SDR42E1Q8WUS8 393 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 BADQ92934 168 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 CCDC127Q96BQ5 260 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 CSPG4P5Q96PW8 444 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 CTRCQ99895 268 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 DCTN5Q9BTE1 182 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 MED10Q9BTT4 135 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 JPT2Q9H910 190 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 GPN2Q9H9Y4 310 aaPredicted RBP4.64□□□□□ -1.67
PCF11-202ENST00000528336 WDR41Q9HAD4 459 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 GNB4Q9HAV0 340 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 PLEKHA3Q9HB20 300 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 OR2S2Q9NQN1 319 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.64□□□□□ -1.67
PCF11-202ENST00000528336 IMP3Q9NV31 184 aaKnown RBP4.64□□□□□ -1.67
PCF11-202ENST00000528336 GPR83Q9NYM4 423 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 STMN3Q9NZ72 180 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 PRPF19Q9UMS4 504 aaKnown RBP4.64□□□□□ -1.67
PCF11-202ENST00000528336 STYXL1Q9Y6J8 313 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 ECM29Q5VYK3 1845 aa4.64□□□□□ -1.67
PCF11-202ENST00000528336 PAPPA2Q9BXP8 1791 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 MYO5AQ9Y4I1 1855 aaKnown RBP4.63□□□□□ -1.67
PCF11-202ENST00000528336 TMEM213A2RRL7 107 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 LRP5LA4QPB2 252 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 CENPBD1B2RD01 187 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 E7ESA3 106 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 GOLGA8MH3BSY2 632 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 CCSO14618 274 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 SH2D1BO14796 132 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 ZBTB5O15062 677 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 RAMP3O60896 148 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 TOXO94900 526 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 ANGPTL1O95841 491 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 HLA-DRAP01903 254 aa4.63□□□□□ -1.67
PCF11-202ENST00000528336 RPN2P04844 631 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms