RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 ZNF566Q969W8 418 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 NMD3Q96D46 503 aaKnown RBP9□□□□□ -0.97
PRPF40B-204ENST00000527253 TPD52L3Q96J77 140 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 ZNF347Q96SE7 839 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 MRPL37Q9BZE1 423 aaKnown RBP9□□□□□ -0.97
PRPF40B-204ENST00000527253 POLR2J2Q9GZM3 115 aaKnown RBP9□□□□□ -0.97
PRPF40B-204ENST00000527253 POLR2J3Q9H1A7 115 aaKnown RBP9□□□□□ -0.97
PRPF40B-204ENST00000527253 MAN2C1Q9NTJ4 1040 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 MRGBPQ9NV56 204 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 TMEM38BQ9NVV0 291 aa9□□□□□ -0.97
PRPF40B-204ENST00000527253 IGKV1D-43A0A0B4J1Z2 117 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 IGHV4-61A0A0C4DH41 118 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 ELOVL7A1L3X0 281 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 SH3PXD2BA1X283 911 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 A8MV72 311 aaPredicted RBP8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 J3KTA2 159 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 NME4O00746 187 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 TRMUO75648 421 aaKnown RBP8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 UBL3O95164 117 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 IGF2P01344 180 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 IFNA14P01570 189 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 CSF3P09919 207 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 MAKP20794 623 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 NR4A2P43354 598 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 FHL1Q13642 323 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 C6orf52Q5T4I8 152 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 PIWIL3Q7Z3Z3 882 aaKnown RBP8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 TSEN54Q7Z6J9 526 aaKnown RBP8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 LRP11Q86VZ4 500 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 HIPK1Q86Z02 1210 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 PAQR4Q8N4S7 273 aaPredicted RBP8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 LRRC75AQ8NAA5 344 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 SYT14Q8NB59 555 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 IL17RDQ8NFM7 739 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 OR4K5Q8NGD3 323 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 MRPL24Q96A35 216 aaKnown RBP8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 PRRC1Q96M27 445 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 INIPQ9NRY2 104 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 MYEF2Q9P2K5 600 aaKnown RBP8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 RHCGQ9UBD6 479 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 UGT2A1Q9Y4X1 527 aa8.99□□□□□ -0.97
PRPF40B-204ENST00000527253 FBN1P35555 2871 aaKnown RBP8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 LYNX1G3V0Z9 82 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 CXCR6O00574 342 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 PRSS23O95084 383 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 SLC2A10O95528 541 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 STAMBPO95630 424 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 RAB36O95755 333 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 IGHG1P01857 330 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 SERPINA5P05154 406 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 ADRA2AP08913 450 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 OR8G3PP0DMU2 310 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 LYNX1P0DP58 116 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 THRBP10828 461 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 CCL2P13500 99 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 ACADSP16219 412 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 GSK3BP49841 420 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 SLC7A2P52569 658 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 ZNF133P52736 654 aaPredicted RBP8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 SEC24CP53992 1094 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 CLRN1P58418 232 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 GGTLC2Q14390 218 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 CARTPTQ16568 116 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 TBPL2Q6SJ96 375 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 ARIH2OSQ8N7S6 290 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 RBM15BQ8NDT2 890 aaKnown RBP8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 NOXO1Q8NFA2 376 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 HDAC2Q92769 488 aaKnown RBP8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 SYT3Q9BQG1 590 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 SOX7Q9BT81 388 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 MYLK2Q9H1R3 596 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 DENND2DQ9H6A0 471 aaPredicted RBP8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 MED4Q9NPJ6 270 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 FZR1Q9UM11 496 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 MED31Q9Y3C7 131 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 CMAHPQ9Y471 501 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 FKBP7Q9Y680 259 aa8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.98□□□□□ -0.97
PRPF40B-204ENST00000527253 LOC390937A0A1W2PQ73 354 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 A0A1W2PRG6 482 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 NDUFS8O00217 210 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 CCDC22O60826 627 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 MMP7P09237 267 aaPredicted RBP8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 IFI30P13284 250 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 DAOP14920 347 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 NCK1P16333 377 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 ZNF16P17020 682 aaPredicted RBP8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 ZNF26P17031 533 aaPredicted RBP8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 CDAP32320 146 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 GLRXP35754 106 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 FMODQ06828 376 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 ST3GAL3Q11203 375 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 MAD2L1BPQ15013 274 aaPredicted RBP8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 HSP90B2PQ58FF3 399 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 C10orf128Q5T292 105 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 CYB5R2Q6BCY4 276 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 SLC25A47Q6Q0C1 308 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 CBLL1Q75N03 491 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 ARPINQ7Z6K5 226 aa8.97□□□□□ -0.97
PRPF40B-204ENST00000527253 IGFN1Q86VF2 1251 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms