RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 ACVR1BP36896 505 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 ARHGDIAP52565 204 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 SH3BGRP55822 239 aaPredicted RBP11.35□□□□□ -0.59
SMPD1-202ENST00000526280 CLRN1P58418 232 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 RAP1BP61224 184 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 RAP1AP62834 184 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 ARF1P84077 181 aaKnown RBP11.35□□□□□ -0.59
SMPD1-202ENST00000526280 COX10Q12887 443 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 TAB1Q15750 504 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 STK11Q15831 433 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 LRRC36Q1X8D7 754 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 GPR139Q6DWJ6 353 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 RPL13AP3Q6NVV1 102 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 AMIGO2Q86SJ2 522 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 HS3ST5Q8IZT8 346 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 C17orf78Q8N4C9 275 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 SYT14Q8NB59 555 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 NOXO1Q8NFA2 376 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 OR1K1Q8NGR3 316 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 OR5K1Q8NHB7 308 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 HDAC2Q92769 488 aaKnown RBP11.35□□□□□ -0.59
SMPD1-202ENST00000526280 BCL2L2Q92843 193 aaPredicted RBP11.35□□□□□ -0.59
SMPD1-202ENST00000526280 C14orf79Q96F83 325 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 ZC3HAV1LQ96H79 300 aaKnown RBP11.35□□□□□ -0.59
SMPD1-202ENST00000526280 SAMD8Q96LT4 415 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 Q96M85 177 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 NR1H4Q96RI1 486 aaPredicted RBP11.35□□□□□ -0.59
SMPD1-202ENST00000526280 KCNK17Q96T54 332 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 NIPSNAP1Q9BPW8 284 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 ALG12Q9BV10 488 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 ULBP2Q9BZM5 246 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 IL20Q9NYY1 176 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 IER3IP1Q9Y5U9 82 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 MAGED1Q9Y5V3 778 aaPredicted RBP11.35□□□□□ -0.59
SMPD1-202ENST00000526280 CDH10Q9Y6N8 788 aa11.35□□□□□ -0.59
SMPD1-202ENST00000526280 ABCA4P78363 2273 aa11.34□□□□□ -0.59
SMPD1-202ENST00000526280 FAM221AA4D161 298 aa11.34□□□□□ -0.59
SMPD1-202ENST00000526280 ZNF99A8MXY4 864 aaPredicted RBP11.34□□□□□ -0.59
SMPD1-202ENST00000526280 ARPC3O15145 178 aa11.34□□□□□ -0.59
SMPD1-202ENST00000526280 TXNDC12O95881 172 aa11.34□□□□□ -0.59
SMPD1-202ENST00000526280 TP53P04637 393 aaPredicted RBP11.34□□□□□ -0.59
SMPD1-202ENST00000526280 QDPRP09417 244 aa11.34□□□□□ -0.59
SMPD1-202ENST00000526280 APEHP13798 732 aaKnown RBP11.34□□□□□ -0.59
SMPD1-202ENST00000526280 ANXA8P13928 327 aa11.34□□□□□ -0.59
SMPD1-202ENST00000526280 SDHAP31040 664 aa11.34□□□□□ -0.59
SMPD1-202ENST00000526280 RPS6KA3P51812 740 aa11.34□□□□□ -0.59
SMPD1-202ENST00000526280 ZNF133P52736 654 aaPredicted RBP11.34□□□□□ -0.59
SMPD1-202ENST00000526280 AQP4P55087 323 aa11.34□□□□□ -0.59
SMPD1-202ENST00000526280 C1QTNF12Q5T7M4 302 aa11.34□□□□□ -0.59
SMPD1-202ENST00000526280 ANKRD16Q6P6B7 361 aa11.34□□□□□ -0.59
SMPD1-202ENST00000526280 ZNF627Q7L945 461 aa11.34□□□□□ -0.59
SMPD1-202ENST00000526280 SSX8Q7RTT4 187 aa11.34□□□□□ -0.59
SMPD1-202ENST00000526280 CLDN22Q8N7P3 220 aa11.34□□□□□ -0.59
SMPD1-202ENST00000526280 WDR31Q8NA23 367 aa11.34□□□□□ -0.59
SMPD1-202ENST00000526280 ICA1LQ8NDH6 482 aa11.34□□□□□ -0.59
SMPD1-202ENST00000526280 MAGEE2Q8TD90 523 aaPredicted RBP11.34□□□□□ -0.59
SMPD1-202ENST00000526280 MCHR2Q969V1 340 aa11.34□□□□□ -0.59
SMPD1-202ENST00000526280 NMD3Q96D46 503 aaKnown RBP11.34□□□□□ -0.59
SMPD1-202ENST00000526280 MUCL1Q96DR8 90 aa11.34□□□□□ -0.59
SMPD1-202ENST00000526280 CENPNQ96H22 339 aaPredicted RBP11.34□□□□□ -0.59
SMPD1-202ENST00000526280 IFT27Q9BW83 186 aa11.34□□□□□ -0.59
SMPD1-202ENST00000526280 NELFAQ9H3P2 528 aa11.34□□□□□ -0.59
SMPD1-202ENST00000526280 EGLN3Q9H6Z9 239 aa11.34□□□□□ -0.59
SMPD1-202ENST00000526280 SLC17A5Q9NRA2 495 aa11.34□□□□□ -0.59
SMPD1-202ENST00000526280 SLC25A15Q9Y619 301 aa11.34□□□□□ -0.59
SMPD1-202ENST00000526280 TEX13CA0A0J9YWL9 993 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 MAGEA13PA6NCF6 341 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 A6NNC1 897 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 VGLL3A8MV65 326 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 G3V2T6 193 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 XKRYO14609 159 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 IMPA2O14732 288 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 ARHGEF9O43307 516 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 DHHO43323 396 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 IDH3BO43837 385 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 AHCYL1O43865 530 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 PPP1R3DO95685 299 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 NR2C1P13056 603 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 PRF1P14222 555 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 HOXB1P14653 301 aaPredicted RBP11.33□□□□□ -0.6
SMPD1-202ENST00000526280 SSTR2P30874 369 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 MYBPC1Q00872 1141 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 PPA1Q15181 289 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 TBRG1Q3YBR2 411 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 HIKESHIQ53FT3 197 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 MESTQ5EB52 335 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 THEM4Q5T1C6 240 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 C10orf128Q5T292 105 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 SLC25A47Q6Q0C1 308 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 KLHL17Q6TDP4 642 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 SEZ6L2Q6UXD5 910 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 HIPK1Q86Z02 1210 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 WFDC8Q8IUA0 241 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 OR52L1Q8NGH7 329 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 OR52N5Q8NH56 324 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 FNDC8Q8TC99 324 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 RASD2Q96D21 266 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 ERMAPQ96PL5 475 aaPredicted RBP11.33□□□□□ -0.6
SMPD1-202ENST00000526280 RBP7Q96R05 134 aa11.33□□□□□ -0.6
SMPD1-202ENST00000526280 PLA2G12AQ9BZM1 189 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms