RNA–Protein interactions for RNA: ENST00000526204.5

VPS28-205, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,120 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-205ENST00000526204 POMZP3Q6PJE2 187 aa19.2■□□□□ 0.66
VPS28-205ENST00000526204 LYPD8Q6UX82 237 aa19.2■□□□□ 0.66
VPS28-205ENST00000526204 SLC29A4Q7RTT9 530 aa19.2■□□□□ 0.66
VPS28-205ENST00000526204 PRSS35Q8N3Z0 413 aa19.2■□□□□ 0.66
VPS28-205ENST00000526204 CADM4Q8NFZ8 388 aa19.2■□□□□ 0.66
VPS28-205ENST00000526204 OR10A4Q9H209 315 aa19.2■□□□□ 0.66
VPS28-205ENST00000526204 BEX1Q9HBH7 125 aa19.2■□□□□ 0.66
VPS28-205ENST00000526204 NOX3Q9HBY0 568 aa19.2■□□□□ 0.66
VPS28-205ENST00000526204 ZNF304Q9HCX3 659 aa19.2■□□□□ 0.66
VPS28-205ENST00000526204 FLVCR2Q9UPI3 526 aa19.2■□□□□ 0.66
VPS28-205ENST00000526204 KNL1Q8NG31 2342 aa19.2■□□□□ 0.66
VPS28-205ENST00000526204 PRSS37A4D1T9 235 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 CDC14CA4D256 554 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 C11orf98E9PRG8 122 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 XRCC3O43542 346 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 GLSO94925 669 aaPredicted RBP19.19■□□□□ 0.66
VPS28-205ENST00000526204 SRFP11831 508 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 RIPPLY1Q0D2K3 151 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 SEZ6L2Q6UXD5 910 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 SIX5Q8N196 739 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 DNAAF1Q8NEP3 725 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 NXPE2Q96DL1 559 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 OR8B4Q96RC9 309 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 CITED4Q96RK1 184 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 UTP23Q9BRU9 249 aaKnown RBP19.19■□□□□ 0.66
VPS28-205ENST00000526204 B9D1Q9UPM9 204 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 OR6C76A6NM76 312 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 HLA-DQA2P01906 255 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 OR3A3P47888 321 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 ZP1P60852 638 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 DMWDQ09019 674 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 C1QL3Q5VWW1 255 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 OR1N1Q8NGS0 311 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 SLC25A36Q96CQ1 311 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 OMA1Q96E52 524 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 PTDSS2Q9BVG9 487 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 KCNG2Q9UJ96 466 aa19.19■□□□□ 0.66
VPS28-205ENST00000526204 ARPC1BO15143 372 aaKnown RBP19.18■□□□□ 0.66
VPS28-205ENST00000526204 CPN1P15169 458 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 FAUP35544 74 aaKnown RBP19.18■□□□□ 0.66
VPS28-205ENST00000526204 RPS27P42677 84 aaKnown RBP19.18■□□□□ 0.66
VPS28-205ENST00000526204 RPS15P62841 145 aaKnown RBP19.18■□□□□ 0.66
VPS28-205ENST00000526204 IKZF1Q13422 519 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 ACKR1Q16570 336 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 SLC18B1Q6NT16 456 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 PLXDC1Q8IUK5 500 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 ZNF679Q8IYX0 411 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 ZNF680Q8NEM1 530 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 OR1L3Q8NH93 324 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 ZNF519Q8TB69 540 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 SORCS2Q96PQ0 1159 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 TXNIPQ9H3M7 391 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 NPDC1Q9NQX5 325 aaPredicted RBP19.18■□□□□ 0.66
VPS28-205ENST00000526204 THADAQ6YHU6 1953 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 A8MVM7 634 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 SUSD5O60279 629 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 NPIPB7O75200 414 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 DXOO77932 396 aaKnown RBP19.18■□□□□ 0.66
VPS28-205ENST00000526204 CSRP1P21291 193 aaKnown RBP19.18■□□□□ 0.66
VPS28-205ENST00000526204 ABCD3P28288 659 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 KIR3DL2P43630 455 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 SLC17A1Q14916 467 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 WDR38Q5JTN6 314 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 GLDNQ6ZMI3 551 aaPredicted RBP19.18■□□□□ 0.66
VPS28-205ENST00000526204 OR51A4Q8NGJ6 313 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 OR2T35Q8NGX2 323 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 OR10AC1Q8NH08 325 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 CEP76Q8TAP6 659 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 ELOVL3Q9HB03 270 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 TAS2R8Q9NYW2 309 aa19.18■□□□□ 0.66
VPS28-205ENST00000526204 VSX1Q9NZR4 365 aaPredicted RBP19.18■□□□□ 0.66
VPS28-205ENST00000526204 IGHV1OR21-1A0A087WYE8 117 aa19.17■□□□□ 0.66
VPS28-205ENST00000526204 TMED7-TICAM2A0A0A6YYA0 188 aa19.17■□□□□ 0.66
VPS28-205ENST00000526204 SLC22A5O76082 557 aa19.17■□□□□ 0.66
VPS28-205ENST00000526204 OR6A2O95222 327 aa19.17■□□□□ 0.66
VPS28-205ENST00000526204 GPANK1O95872 356 aa19.17■□□□□ 0.66
VPS28-205ENST00000526204 MECP2P51608 486 aaKnown RBP19.17■□□□□ 0.66
VPS28-205ENST00000526204 NXPH1P58417 271 aa19.17■□□□□ 0.66
VPS28-205ENST00000526204 CLPPQ16740 277 aaPredicted RBP19.17■□□□□ 0.66
VPS28-205ENST00000526204 MEP1BQ16820 701 aa19.17■□□□□ 0.66
VPS28-205ENST00000526204 VWA2Q5GFL6 755 aa19.17■□□□□ 0.66
VPS28-205ENST00000526204 ANKRD16Q6P6B7 361 aa19.17■□□□□ 0.66
VPS28-205ENST00000526204 C5orf46Q6UWT4 87 aa19.17■□□□□ 0.66
VPS28-205ENST00000526204 GLB1L2Q8IW92 636 aa19.17■□□□□ 0.66
VPS28-205ENST00000526204 D2HGDHQ8N465 521 aa19.17■□□□□ 0.66
VPS28-205ENST00000526204 FAM109AQ8N4B1 249 aa19.17■□□□□ 0.66
VPS28-205ENST00000526204 SPICQ8N5J4 248 aa19.17■□□□□ 0.66
VPS28-205ENST00000526204 TSEN15Q8WW01 171 aaKnown RBP19.17■□□□□ 0.66
VPS28-205ENST00000526204 CLEC4MQ9H2X3 399 aaPredicted RBP19.17■□□□□ 0.66
VPS28-205ENST00000526204 METTL17Q9H7H0 456 aaPredicted RBP19.17■□□□□ 0.66
VPS28-205ENST00000526204 HEXA-AS1Q9H8Q6 139 aa19.17■□□□□ 0.66
VPS28-205ENST00000526204 GPN1Q9HCN4 374 aaPredicted RBP19.17■□□□□ 0.66
VPS28-205ENST00000526204 CDV3Q9UKY7 258 aaKnown RBP19.17■□□□□ 0.66
VPS28-205ENST00000526204 TMED7Q9Y3B3 224 aa19.17■□□□□ 0.66
VPS28-205ENST00000526204 MTCH2Q9Y6C9 303 aa19.17■□□□□ 0.66
VPS28-205ENST00000526204 TNFRSF10AO00220 468 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 ICMTO60725 284 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 SDC3O75056 442 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 RBBP9O75884 186 aa19.16■□□□□ 0.66
VPS28-205ENST00000526204 NDUFB6O95139 128 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms