RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 EFL1Q7Z2Z2 1120 aaKnown RBP2.96□□□□□ -1.94
CD44-219ENST00000525685 GOLGA7Q7Z5G4 137 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 GKN2Q86XP6 184 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 ZNF547Q8IVP9 402 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 SPATA4Q8NEY3 305 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 OR4F17Q8NGA8 305 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 SLC13A3Q8WWT9 602 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 PATE1Q8WXA2 126 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 SERPINB12Q96P63 405 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 OR4F4Q96R69 305 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 OR5M11Q96RB7 305 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 SPXQ9BT56 116 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 NDUFAF3Q9BU61 184 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 KIFC1Q9BW19 673 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 IL22Q9GZX6 179 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 SIRPDQ9H106 197 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 OR2AG1Q9H205 316 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 FAM96AQ9H5X1 160 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 TMEM231Q9H6L2 316 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 ALG9Q9H6U8 611 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 ASB8Q9H765 288 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 UGT1A7Q9HAW7 530 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 UGT1A10Q9HAW8 530 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 UGT1A8Q9HAW9 530 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 MRM3Q9HC36 420 aaKnown RBP2.96□□□□□ -1.94
CD44-219ENST00000525685 FANCFQ9NPI8 374 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 TREX1Q9NSU2 369 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 NLE1Q9NVX2 485 aaPredicted RBP2.96□□□□□ -1.94
CD44-219ENST00000525685 IMPAD1Q9NX62 359 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 IL20Q9NYY1 176 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 RNF14Q9UBS8 474 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 MIOXQ9UGB7 285 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 SLC2A6Q9UGQ3 507 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 MLXQ9UH92 298 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 RPH3AQ9Y2J0 694 aaPredicted RBP2.96□□□□□ -1.94
CD44-219ENST00000525685 USP34Q70CQ2 3546 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 GON4LQ3T8J9 2241 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 WDFY4Q6ZS81 3184 aa2.96□□□□□ -1.94
CD44-219ENST00000525685 HCFC1P51610 2035 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 PI4KAP42356 2102 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 IGLV3-16A0A075B6K0 115 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 RNF103-CHMP3A0A140T963 221 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 LRIT2A6NDA9 550 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 MGAT4DA6NG13 374 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 GOLGA8KD6RF30 607 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 GOLGA8TH3BQL2 631 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 KIF2AO00139 706 aaPredicted RBP2.95□□□□□ -1.94
CD44-219ENST00000525685 AP3B1O00203 1094 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 SAP18O00422 153 aaKnown RBP2.95□□□□□ -1.94
CD44-219ENST00000525685 KMOO15229 486 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 CASC3O15234 703 aaKnown RBP2.95□□□□□ -1.94
CD44-219ENST00000525685 TYROBPO43914 113 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 LCMT2O60294 686 aaKnown RBP2.95□□□□□ -1.94
CD44-219ENST00000525685 CDK14O94921 469 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 SLC25A14O95258 325 aaPredicted RBP2.95□□□□□ -1.94
CD44-219ENST00000525685 STAMBPO95630 424 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 ALPPP05187 535 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 PVRP15151 417 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 ZNF7P17097 686 aaPredicted RBP2.95□□□□□ -1.94
CD44-219ENST00000525685 OGNP20774 298 aaKnown RBP2.95□□□□□ -1.94
CD44-219ENST00000525685 ACP1P24666 158 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 PBLDP30039 288 aaPredicted RBP2.95□□□□□ -1.94
CD44-219ENST00000525685 PRLHRP49683 370 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 SLC26A5P58743 744 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 PPIAP62937 165 aaKnown RBP2.95□□□□□ -1.94
CD44-219ENST00000525685 HERVK_113P63132 956 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 ERVK-8P63133 956 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 CDK16Q00536 496 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 ITIH4Q14624 930 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 CD226Q15762 336 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 WHAMMP3Q1A5X7 153 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 ZNF658BQ4V348 819 aaPredicted RBP2.95□□□□□ -1.94
CD44-219ENST00000525685 BCL7AQ4VC05 210 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 CTSL3PQ5NE16 218 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 C8orf74Q6P047 294 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 GUSBP11Q6P575 273 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 TMEM220Q6QAJ8 160 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 CES3Q6UWW8 571 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 TMEM26Q6ZUK4 368 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 NLRP9Q7RTR0 991 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 TAS2R42Q7RTR8 314 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 PRSS48Q7RTY5 328 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 TMEM135Q86UB9 458 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 SERPINA9Q86WD7 417 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 C17orf82Q86X59 251 aaPredicted RBP2.95□□□□□ -1.94
CD44-219ENST00000525685 TRAPPC5Q8IUR0 188 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 PIANPQ8IYJ0 282 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 SLC7A5P1Q8MH63 180 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 OR52E1Q8NGJ3 308 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 WDR36Q8NI36 951 aaKnown RBP2.95□□□□□ -1.94
CD44-219ENST00000525685 FLVCR1-AS1Q8TAF5 88 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 LKAAEAR1Q8TD35 194 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 ACMSDQ8TDX5 336 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 SLC37A2Q8TED4 501 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.95□□□□□ -1.94
CD44-219ENST00000525685 PEX13Q92968 403 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.95□□□□□ -1.94
CD44-219ENST00000525685 SNF8Q96H20 258 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 COPS8Q99627 209 aa2.95□□□□□ -1.94
CD44-219ENST00000525685 TIMM29Q9BSF4 260 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms