RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 TCTEX1D4Q5JR98 221 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 SAMD13Q5VXD3 122 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 KIAA0895LQ68EN5 471 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 DEF8Q6ZN54 512 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 LRRC69Q6ZNQ3 347 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 UBE3DQ7Z6J8 389 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 TECPR1Q7Z6L1 1165 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 ADAT2Q7Z6V5 191 aaKnown RBP6.86□□□□□ -1.31
HDAC3-216ENST00000523088 CCDC190Q86UF4 302 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 TRAPPC5Q8IUR0 188 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 DEFB106AQ8N104 65 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 LGI3Q8N145 548 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 OR13J1Q8NGT2 312 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 OR10R2Q8NGX6 335 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 OR14K1Q8NGZ2 314 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 ZNF431Q8TF32 576 aaPredicted RBP6.86□□□□□ -1.31
HDAC3-216ENST00000523088 NPRL2Q8WTW4 380 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 OR8D1Q8WZ84 308 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 TFAP2CQ92754 450 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 KCNJ9Q92806 393 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 TAAR8Q969N4 342 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 IGSF8Q969P0 613 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 ZNF775Q96BV0 537 aaPredicted RBP6.86□□□□□ -1.31
HDAC3-216ENST00000523088 BIRC7Q96CA5 298 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 DTD2Q96FN9 168 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 P2RY11Q96G91 374 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 TCTN2Q96GX1 697 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 RBP7Q96R05 134 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 CPXM1Q96SM3 734 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 RBM15Q96T37 977 aaKnown RBP eCLIP6.86□□□□□ -1.313e-6■■■■□ 20.8
HDAC3-216ENST00000523088 RSG1Q9BU20 258 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 MS4A7Q9GZW8 240 aaPredicted RBP6.86□□□□□ -1.31
HDAC3-216ENST00000523088 NUAK2Q9H093 628 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 MAGT1Q9H0U3 335 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 ATG10Q9H0Y0 220 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 SLC25A18Q9H1K4 315 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 OR2AG1Q9H205 316 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 MTG2Q9H4K7 406 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 FAM96AQ9H5X1 160 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 WDCPQ9H6R7 721 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 TUBA4BQ9H853 241 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 DNAJC4Q9NNZ3 241 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 GPR83Q9NYM4 423 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 ENTPD2Q9Y5L3 495 aa6.86□□□□□ -1.31
HDAC3-216ENST00000523088 PLXNA2O75051 1894 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 PRSS51A0A1B0GVH4 220 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 TCRBV16S1A1N1A0A5B0 115 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 G3V3Y1 287 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 RAD51CO43502 376 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 SNAI2O43623 268 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 WDR1O75083 606 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 UPK3AO75631 287 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 TXNDC12O95881 172 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 RD3LP0DJH9 198 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 CD59P13987 128 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 AOAHP28039 575 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 SERPINA4P29622 427 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 KDELR2P33947 212 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 SGSHP51688 502 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 PNLIPRP1P54315 467 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 GABARAPL2P60520 117 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 SH3BP2P78314 561 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 PSG6Q00889 435 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 SKP2Q13309 424 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 KIAA0141Q14154 515 aaPredicted RBP6.85□□□□□ -1.31
HDAC3-216ENST00000523088 PRPSAP1Q14558 356 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 SPA17Q15506 151 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 TRIP6Q15654 476 aaKnown RBP6.85□□□□□ -1.31
HDAC3-216ENST00000523088 NSDHLQ15738 373 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 MAPK11Q15759 364 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 PRTGQ2VWP7 1150 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 SLC25A52Q3SY17 297 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 TMEM176BQ3YBM2 270 aaPredicted RBP6.85□□□□□ -1.31
HDAC3-216ENST00000523088 SLC25A53Q5H9E4 307 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 GCSAMLQ5JQS6 135 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 MIIPQ5JXC2 388 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 FAM74A1Q5RGS3 127 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 C10orf91Q5T1B1 145 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 NCMAPQ5T1S8 102 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 FAM102AQ5T9C2 384 aaPredicted RBP6.85□□□□□ -1.31
HDAC3-216ENST00000523088 H3F3CQ6NXT2 135 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 GJB7Q6PEY0 223 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 NCEH1Q6PIU2 408 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 UNQ6494/PRO21346Q6UXR6 183 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 SLC47A2Q86VL8 602 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 CILP2Q8IUL8 1156 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 CFAP52Q8N1V2 620 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 DEFB119Q8N690 84 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 AMER2Q8N7J2 671 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 DCAF4L2Q8NA75 395 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 UBAC2Q8NBM4 344 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 OR7A2PQ8NGA2 310 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 OR56A1Q8NGH5 318 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 OR13C8Q8NGS7 320 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 OR10A6Q8NH74 314 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 OR5AK3PQ8NH89 298 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 SLC2A12Q8TD20 617 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 ZDHHC1Q8WTX9 485 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 TMEM45BQ96B21 275 aa6.85□□□□□ -1.31
HDAC3-216ENST00000523088 THOC3Q96J01 351 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms