RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 H7C0C1 242 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 MBTPS2O43462 519 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 CLPXO76031 633 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 FGGP02679 453 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 RBMY1CP0DJD4 496 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 TCN1P20061 433 aaPredicted RBP3.01□□□□□ -1.93
SQLE-204ENST00000520493 NTSP30990 170 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 MDH2P40926 338 aaKnown RBP3.01□□□□□ -1.93
SQLE-204ENST00000520493 SLC1A2P43004 574 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 GSSP48637 474 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 ARRB1P49407 418 aaPredicted RBP3.01□□□□□ -1.93
SQLE-204ENST00000520493 RIPPLY3P57055 190 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 KRTAP12-2P59991 146 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 CYTH1Q15438 398 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 PRR30Q53SZ7 412 aaPredicted RBP3.01□□□□□ -1.93
SQLE-204ENST00000520493 HSP90B2PQ58FF3 399 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 SOHLH1Q5JUK2 328 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 ZNF658Q5TYW1 1059 aaPredicted RBP3.01□□□□□ -1.93
SQLE-204ENST00000520493 TIGD3Q6B0B8 471 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 ULK3Q6PHR2 472 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 TFAP2EQ6VUC0 442 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 LHFPL3Q86UP9 236 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 SLC26A11Q86WA9 606 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 NAXDQ8IW45 347 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 EID2Q8N6I1 236 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 ZNF557Q8N988 423 aaPredicted RBP3.01□□□□□ -1.93
SQLE-204ENST00000520493 ASCC1Q8N9N2 400 aaKnown RBP3.01□□□□□ -1.93
SQLE-204ENST00000520493 LRRC75AQ8NAA5 344 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 TMEM104Q8NE00 496 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 OR10G3Q8NGC4 313 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 LYPD6BQ8NI32 183 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 CD300LFQ8TDQ1 290 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 CXorf40AQ8TE69 158 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 CHCHD10Q8WYQ3 142 aaPredicted RBP3.01□□□□□ -1.93
SQLE-204ENST00000520493 FGF14Q92915 247 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 NOL4LQ96MY1 436 aaPredicted RBP3.01□□□□□ -1.93
SQLE-204ENST00000520493 ECSITQ9BQ95 431 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 UCK2Q9BZX2 261 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 ACTR6Q9GZN1 396 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 C20orf85Q9H1P6 137 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 CWH43Q9H720 699 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 ISG20L2Q9H9L3 353 aaKnown RBP3.01□□□□□ -1.93
SQLE-204ENST00000520493 IL26Q9NPH9 171 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 EXD2Q9NVH0 621 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 HRASLS2Q9NWW9 162 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 CCDC59Q9P031 241 aaKnown RBP3.01□□□□□ -1.93
SQLE-204ENST00000520493 RSPH14Q9UHP6 348 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 LGALS13Q9UHV8 139 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 GMEB1Q9Y692 573 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 V9GY05 133 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 ADAMTS9Q9P2N4 1935 aa3.01□□□□□ -1.93
SQLE-204ENST00000520493 COL22A1Q8NFW1 1626 aaPredicted RBP3.01□□□□□ -1.93
SQLE-204ENST00000520493 RLFQ13129 1914 aa3□□□□□ -1.93
SQLE-204ENST00000520493 IGLV3-22A0A075B6J6 115 aa3□□□□□ -1.93
SQLE-204ENST00000520493 A0A0G2JRQ6 117 aa3□□□□□ -1.93
SQLE-204ENST00000520493 USP27XA6NNY8 438 aa3□□□□□ -1.93
SQLE-204ENST00000520493 PPP1R2P9O14990 202 aa3□□□□□ -1.93
SQLE-204ENST00000520493 ZBTB5O15062 677 aa3□□□□□ -1.93
SQLE-204ENST00000520493 TBL1XO60907 577 aa3□□□□□ -1.93
SQLE-204ENST00000520493 ZNF254O75437 659 aa3□□□□□ -1.93
SQLE-204ENST00000520493 IFNW1P05000 195 aa3□□□□□ -1.93
SQLE-204ENST00000520493 SLC2A5P22732 501 aa3□□□□□ -1.93
SQLE-204ENST00000520493 GDF1P27539 372 aa3□□□□□ -1.93
SQLE-204ENST00000520493 PRKAR2BP31323 418 aa3□□□□□ -1.93
SQLE-204ENST00000520493 IL2RGP31785 369 aa3□□□□□ -1.93
SQLE-204ENST00000520493 GLP1RP43220 463 aa3□□□□□ -1.93
SQLE-204ENST00000520493 RGRP47804 291 aa3□□□□□ -1.93
SQLE-204ENST00000520493 NPBWR2P48146 333 aa3□□□□□ -1.93
SQLE-204ENST00000520493 YWHAEP62258 255 aaKnown RBP3□□□□□ -1.93
SQLE-204ENST00000520493 XIAPP98170 497 aa3□□□□□ -1.93
SQLE-204ENST00000520493 SLAQ13239 276 aa3□□□□□ -1.93
SQLE-204ENST00000520493 UNQ9370/PRO34162Q6UXP9 181 aa3□□□□□ -1.93
SQLE-204ENST00000520493 PRSS41Q7RTY9 318 aa3□□□□□ -1.93
SQLE-204ENST00000520493 FAM122BQ7Z309 247 aa3□□□□□ -1.93
SQLE-204ENST00000520493 CMC1Q7Z7K0 106 aa3□□□□□ -1.93
SQLE-204ENST00000520493 C11orf53Q8IXP5 236 aa3□□□□□ -1.93
SQLE-204ENST00000520493 ZNF100Q8IYN0 542 aa3□□□□□ -1.93
SQLE-204ENST00000520493 CMTM1Q8IZ96 169 aa3□□□□□ -1.93
SQLE-204ENST00000520493 ST13P4Q8IZP2 240 aaPredicted RBP3□□□□□ -1.93
SQLE-204ENST00000520493 KLHL30-AS1Q8NEE0 82 aa3□□□□□ -1.93
SQLE-204ENST00000520493 OR51L1Q8NGJ5 315 aa3□□□□□ -1.93
SQLE-204ENST00000520493 GTSF1Q8WW33 167 aa3□□□□□ -1.93
SQLE-204ENST00000520493 CAPSLQ8WWF8 208 aa3□□□□□ -1.93
SQLE-204ENST00000520493 MYDGFQ969H8 173 aa3□□□□□ -1.93
SQLE-204ENST00000520493 TM6SF2Q9BZW4 377 aa3□□□□□ -1.93
SQLE-204ENST00000520493 OR2AG1Q9H205 316 aa3□□□□□ -1.93
SQLE-204ENST00000520493 Q9H3A6 140 aa3□□□□□ -1.93
SQLE-204ENST00000520493 ZNF702PQ9H963 129 aa3□□□□□ -1.93
SQLE-204ENST00000520493 ZC4H2Q9NQZ6 224 aa3□□□□□ -1.93
SQLE-204ENST00000520493 KCNIP1Q9NZI2 227 aa3□□□□□ -1.93
SQLE-204ENST00000520493 IFNKQ9P0W0 207 aa3□□□□□ -1.93
SQLE-204ENST00000520493 MMP17Q9ULZ9 603 aa3□□□□□ -1.93
SQLE-204ENST00000520493 ERCC6L2Q5T890 1561 aa3□□□□□ -1.93
SQLE-204ENST00000520493 IGHV3OR16-13A0A075B7E8 117 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 FAM231BA6NCW3 169 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 K7N7A8 449 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 SCAMP2O15127 329 aaKnown RBP2.99□□□□□ -1.93
SQLE-204ENST00000520493 SIVA1O15304 175 aa2.99□□□□□ -1.93
SQLE-204ENST00000520493 HSBP1O75506 76 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms