RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 FEM1AQ9BSK4 669 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 DCTN5Q9BTE1 182 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZSCAN5AQ9BUG6 496 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 CCDC32Q9BV29 185 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 NTMT1Q9BV86 223 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 SNRNP25Q9BV90 132 aaKnown RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 UGT2B28Q9BY64 529 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 NT5DC2Q9H857 520 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 UCK1Q9HA47 277 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 RPS10P5Q9NQ39 176 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 MRPL40Q9NQ50 206 aaKnown RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 SLC7A10Q9NS82 523 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 MED9Q9NWA0 146 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 SLC39A1Q9NY26 324 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 CCDC59Q9P031 241 aaKnown RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 MRTO4Q9UKD2 239 aaKnown RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 TMCC3Q9ULS5 477 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 STAP1Q9ULZ2 295 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 UBQLN1Q9UMX0 589 aaKnown RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 MRPS2Q9Y399 296 aaKnown RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 Q9Y3F1 56 aa2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 TDRD15B5MCY1 1934 aaKnown RBP2.59□□□□□ -1.99
HMGB1P41-201ENST00000520234 BRWD3Q6RI45 1802 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 PDCD11Q14690 1871 aaKnown RBP2.58□□□□□ -2
HMGB1P41-201ENST00000520234 A0A075B6Q4 140 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 A0A1B0GTH9 108 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 SMIM28A0A1B0GU29 152 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 DHRS12A0PJE2 317 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 PQLC2LA1A4F0 135 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 HEATR9A2RTY3 570 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 YJEFN3A6XGL0 299 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 ZNF99A8MXY4 864 aaPredicted RBP2.58□□□□□ -2
HMGB1P41-201ENST00000520234 LINC00587B1AMM8 73 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 SRRM5B3KS81 715 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 B4DXG7 233 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 H0YC42 278 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 HAS3O00219 553 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 SLC28A1O00337 649 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 EI24O14681 340 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 SULT1B1O43704 296 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 CABYRO75952 493 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 ANXA9O76027 345 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 MFN2O95140 757 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 AP2A1O95782 977 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 SNAI1O95863 264 aaPredicted RBP2.58□□□□□ -2
HMGB1P41-201ENST00000520234 TXNDC12O95881 172 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 PNPP00491 289 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 RENP00797 406 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 HLA-DQB1P01920 261 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 IFNA16P05015 189 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 KRT8P05787 483 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 C2P06681 752 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 CAPN1P07384 714 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 APRTP07741 180 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 GFAPP14136 432 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 CYP2B6P20813 491 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 FCARP24071 287 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 RPL14P50914 215 aaKnown RBP2.58□□□□□ -2
HMGB1P41-201ENST00000520234 SMSP52788 366 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 GBX2P52951 348 aaPredicted RBP2.58□□□□□ -2
HMGB1P41-201ENST00000520234 UCP2P55851 309 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 DNAJB13P59910 316 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 NCS1P62166 190 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 DYNLT1P63172 113 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 SP4Q02446 784 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 RGS1Q08116 209 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 CD47Q08722 323 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 RIPPLY1Q0D2K3 151 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 SLAMF1Q13291 335 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 ASAH1Q13510 395 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 TSTA3Q13630 321 aaPredicted RBP2.58□□□□□ -2
HMGB1P41-201ENST00000520234 GK2Q14410 553 aaPredicted RBP2.58□□□□□ -2
HMGB1P41-201ENST00000520234 AANATQ16613 207 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 CCL14Q16627 93 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 MICAQ29983 383 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 GOLGA7BQ2TAP0 167 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 WSCD2Q2TBF2 565 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 KRTAP13-3Q3SY46 172 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 ZNF404Q494X3 552 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 BCL7AQ4VC05 210 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 COQ5Q5HYK3 327 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 TOR1AIP1Q5JTV8 583 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 CLLU1Q5K131 121 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 SAMD4BQ5PRF9 694 aaKnown RBP2.58□□□□□ -2
HMGB1P41-201ENST00000520234 SLC25A30Q5SVS4 291 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 ZNF691Q5VV52 312 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 TMEM236Q5W0B7 351 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 NCBP2-AS2Q69YL0 99 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 ZNF774Q6NX45 483 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 DLEU7Q6UYE1 221 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 B3GLCTQ6Y288 498 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 Q6ZRG5 221 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 PAQR9Q6ZVX9 377 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 ARMCX2Q7L311 632 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 PAGE2Q7Z2X7 111 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 HDDC2Q7Z4H3 204 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 ACOT1Q86TX2 421 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 STHQ8IWL8 128 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 CNTN4Q8IWV2 1026 aa2.58□□□□□ -2
HMGB1P41-201ENST00000520234 CTAGE3PQ8IX95 158 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms