RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 TWF2Q6IBS0 349 aaKnown RBP2.42□□□□□ -2.02
HERC4-215ENST00000515753 FAM199XQ6PEV8 388 aaPredicted RBP2.42□□□□□ -2.02
HERC4-215ENST00000515753 REG3GQ6UW15 175 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 LRRC31Q6UY01 552 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 SLC25A48Q6ZT89 311 aaKnown RBP2.42□□□□□ -2.02
HERC4-215ENST00000515753 CCDC65Q8IXS2 484 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 ATP6V0D2Q8N8Y2 350 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 OR4F6Q8NGB9 312 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 TRUB1Q8WWH5 349 aaKnown RBP2.42□□□□□ -2.02
HERC4-215ENST00000515753 STMN2Q93045 179 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 C8orf44Q96CB5 159 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 FAF2Q96CS3 445 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 GLT1D1Q96MS3 346 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 KCNA7Q96RP8 456 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 CDX2Q99626 313 aaPredicted RBP2.42□□□□□ -2.02
HERC4-215ENST00000515753 GAL3ST1Q99999 423 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 RIOK1Q9BRS2 568 aaKnown RBP2.42□□□□□ -2.02
HERC4-215ENST00000515753 MRPL37Q9BZE1 423 aaKnown RBP2.42□□□□□ -2.02
HERC4-215ENST00000515753 PPA2Q9H2U2 334 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 ZNHIT6Q9NWK9 470 aaKnown RBP2.42□□□□□ -2.02
HERC4-215ENST00000515753 STOX2Q9P2F5 926 aaPredicted RBP2.42□□□□□ -2.02
HERC4-215ENST00000515753 PRO0461Q9UI25 63 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 ELP1O95163 1332 aa2.42□□□□□ -2.02
HERC4-215ENST00000515753 LAMB4A4D0S4 1761 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 KDM3BQ7LBC6 1761 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 TRABD2BA6NFA1 517 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 SMCO2A6NFE2 343 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 DLGAP1O14490 977 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 NVLO15381 856 aaKnown RBP2.41□□□□□ -2.02
HERC4-215ENST00000515753 YKT6O15498 198 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 LATO43561 262 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 LYPD3O95274 346 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 FGFR1OPO95684 399 aaKnown RBP2.41□□□□□ -2.02
HERC4-215ENST00000515753 P04436 131 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 POLR2EP19388 210 aaKnown RBP2.41□□□□□ -2.02
HERC4-215ENST00000515753 GSTM3P21266 225 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 GTF2E2P29084 291 aaKnown RBP2.41□□□□□ -2.02
HERC4-215ENST00000515753 LONP1P36776 959 aaKnown RBP2.41□□□□□ -2.02
HERC4-215ENST00000515753 ACVR1BP36896 505 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 ANP32AP39687 249 aaKnown RBP2.41□□□□□ -2.02
HERC4-215ENST00000515753 LEPP41159 167 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 XCR1P46094 333 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 RFX3P48380 749 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 HLCSP50747 726 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 CLDN18P56856 261 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 SCRN3Q0VDG4 424 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 ST3GAL3Q11203 375 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 DUSP7Q16829 419 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 Q1RN00 199 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 MICAQ29983 383 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 LRRC26Q2I0M4 334 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 ISXQ2M1V0 245 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 HNRNPA1L2Q32P51 320 aaKnown RBP2.41□□□□□ -2.02
HERC4-215ENST00000515753 CNPY1Q3B7I2 92 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 XKR4Q5GH76 650 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 UTF1Q5T230 341 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 LIN9Q5TKA1 542 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 C9orf135Q5VTT2 229 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 METTL11BQ5VVY1 283 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 OLFML2AQ68BL7 652 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 ARMCX5Q6P1M9 558 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 EMBQ6PCB8 327 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 SASS6Q6UVJ0 657 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 CERS6Q6ZMG9 384 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 TMEM179Q6ZVK1 233 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 NUDCD3Q8IVD9 361 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 CATSPER1Q8NEC5 780 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 B3GNT7Q8NFL0 401 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 OR2T33Q8NG76 320 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 OR4A4PQ8NGN8 299 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 OR4Q3Q8NH05 313 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 MARCH1Q8TCQ1 289 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 DTX3LQ8TDB6 740 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 AGAP11Q8TF27 550 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 ITLN1Q8WWA0 313 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 UFD1Q92890 307 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.41□□□□□ -2.02
HERC4-215ENST00000515753 FAM122AQ96E09 287 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 CELF6Q96J87 481 aaKnown RBP2.41□□□□□ -2.02
HERC4-215ENST00000515753 PANX2Q96RD6 677 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 RNF2Q99496 336 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 HCAR1Q9BXC0 346 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 TEKT3Q9BXF9 490 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 RACGAP1Q9H0H5 632 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 OPN3Q9H1Y3 402 aaPredicted RBP2.41□□□□□ -2.02
HERC4-215ENST00000515753 REEP4Q9H6H4 257 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 LYRM4Q9HD34 91 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 INPP5EQ9NRR6 644 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 PNO1Q9NRX1 252 aaKnown RBP2.41□□□□□ -2.02
HERC4-215ENST00000515753 GPATCH2LQ9NWQ4 482 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 ZNF446Q9NWS9 450 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 WARS2Q9UGM6 360 aaKnown RBP2.41□□□□□ -2.02
HERC4-215ENST00000515753 ANGPTL2Q9UKU9 493 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 ERVW-1Q9UQF0 538 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 ANKRD36CQ5JPF3 1778 aa2.41□□□□□ -2.02
HERC4-215ENST00000515753 DDX60Q8IY21 1712 aaKnown RBP2.4□□□□□ -2.02
HERC4-215ENST00000515753 RFX7Q2KHR2 1363 aa2.4□□□□□ -2.02
HERC4-215ENST00000515753 TRPM7Q96QT4 1865 aa2.4□□□□□ -2.03
HERC4-215ENST00000515753 KCNE1BA0A087WTH5 132 aa2.4□□□□□ -2.03
HERC4-215ENST00000515753 LOC100506127A0A0U1RQW1 187 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms