RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 PLEKHF2Q9H8W4 249 aa22.71■■□□□ 1.23
DDR1-279ENST00000515529 VNN3Q9NY84 501 aa22.71■■□□□ 1.23
DDR1-279ENST00000515529 IL20RAQ9UHF4 553 aa22.71■■□□□ 1.23
DDR1-279ENST00000515529 MGAT4BQ9UQ53 548 aa22.71■■□□□ 1.23
DDR1-279ENST00000515529 ADAM18Q9Y3Q7 739 aa22.71■■□□□ 1.23
DDR1-279ENST00000515529 APCP25054 2843 aa22.71■■□□□ 1.23
DDR1-279ENST00000515529 DPRXA6NFQ7 191 aa22.7■■□□□ 1.22
DDR1-279ENST00000515529 ARHGEF9O43307 516 aa22.7■■□□□ 1.22
DDR1-279ENST00000515529 E2F6O75461 281 aa22.7■■□□□ 1.22
DDR1-279ENST00000515529 FARS2O95363 451 aaKnown RBP22.7■■□□□ 1.22
DDR1-279ENST00000515529 SLC6A6P31641 620 aa22.7■■□□□ 1.22
DDR1-279ENST00000515529 GSSP48637 474 aa22.7■■□□□ 1.22
DDR1-279ENST00000515529 RPS6KA3P51812 740 aa22.7■■□□□ 1.22
DDR1-279ENST00000515529 TUBA1BP68363 451 aa22.7■■□□□ 1.22
DDR1-279ENST00000515529 TUBA4AP68366 448 aa22.7■■□□□ 1.22
DDR1-279ENST00000515529 HIST3H3Q16695 136 aa22.7■■□□□ 1.22
DDR1-279ENST00000515529 MICAQ29983 383 aa22.7■■□□□ 1.22
DDR1-279ENST00000515529 GPR139Q6DWJ6 353 aa22.7■■□□□ 1.22
DDR1-279ENST00000515529 DPY19L2P2Q6ZN68 376 aa22.7■■□□□ 1.22
DDR1-279ENST00000515529 TUBA1AQ71U36 451 aa22.7■■□□□ 1.22
DDR1-279ENST00000515529 ASRGL1Q7L266 308 aa22.7■■□□□ 1.22
DDR1-279ENST00000515529 AQP11Q8NBQ7 271 aa22.7■■□□□ 1.22
DDR1-279ENST00000515529 ZNF519Q8TB69 540 aa22.7■■□□□ 1.22
DDR1-279ENST00000515529 GPX7Q96SL4 187 aaPredicted RBP22.7■■□□□ 1.22
DDR1-279ENST00000515529 OR52D1Q9H346 318 aa22.7■■□□□ 1.22
DDR1-279ENST00000515529 NELFAQ9H3P2 528 aa22.7■■□□□ 1.22
DDR1-279ENST00000515529 CCM2LQ9NUG4 571 aaPredicted RBP22.7■■□□□ 1.22
DDR1-279ENST00000515529 A0A1W2PPR1 153 aa22.69■■□□□ 1.22
DDR1-279ENST00000515529 ABCD4O14678 606 aa22.69■■□□□ 1.22
DDR1-279ENST00000515529 ZNF26P17031 533 aaPredicted RBP22.69■■□□□ 1.22
DDR1-279ENST00000515529 THEM4Q5T1C6 240 aa22.69■■□□□ 1.22
DDR1-279ENST00000515529 DEPDC4Q8N2C3 294 aa22.69■■□□□ 1.22
DDR1-279ENST00000515529 PIAS4Q8N2W9 510 aaPredicted RBP22.69■■□□□ 1.22
DDR1-279ENST00000515529 Q96M85 177 aa22.69■■□□□ 1.22
DDR1-279ENST00000515529 KCNK17Q96T54 332 aa22.69■■□□□ 1.22
DDR1-279ENST00000515529 KCNS3Q9BQ31 491 aa22.69■■□□□ 1.22
DDR1-279ENST00000515529 TMEM204Q9BSN7 226 aa22.69■■□□□ 1.22
DDR1-279ENST00000515529 SMURF2Q9HAU4 748 aa22.69■■□□□ 1.22
DDR1-279ENST00000515529 IER3IP1Q9Y5U9 82 aa22.69■■□□□ 1.22
DDR1-279ENST00000515529 PRR14LQ5THK1 2151 aa22.68■■□□□ 1.22
DDR1-279ENST00000515529 TEX13CA0A0J9YWL9 993 aa22.68■■□□□ 1.22
DDR1-279ENST00000515529 PLAUP00749 431 aa22.68■■□□□ 1.22
DDR1-279ENST00000515529 CD79AP11912 226 aa22.68■■□□□ 1.22
DDR1-279ENST00000515529 DNASE1P24855 282 aa22.68■■□□□ 1.22
DDR1-279ENST00000515529 CD40P25942 277 aa22.68■■□□□ 1.22
DDR1-279ENST00000515529 KRR1Q13601 381 aaKnown RBP22.68■■□□□ 1.22
DDR1-279ENST00000515529 KEAP1Q14145 624 aa22.68■■□□□ 1.22
DDR1-279ENST00000515529 RFX4Q33E94 735 aa22.68■■□□□ 1.22
DDR1-279ENST00000515529 RPL13AP3Q6NVV1 102 aa22.68■■□□□ 1.22
DDR1-279ENST00000515529 ADAM5Q6NVV9 412 aa22.68■■□□□ 1.22
DDR1-279ENST00000515529 THSD4Q6ZMP0 1018 aa22.68■■□□□ 1.22
DDR1-279ENST00000515529 ZNF627Q7L945 461 aa22.68■■□□□ 1.22
DDR1-279ENST00000515529 PAPD5Q8NDF8 572 aaKnown RBP22.68■■□□□ 1.22
DDR1-279ENST00000515529 OR10G2Q8NGC3 310 aa22.68■■□□□ 1.22
DDR1-279ENST00000515529 OR52L1Q8NGH7 329 aa22.68■■□□□ 1.22
DDR1-279ENST00000515529 GIPC3Q8TF64 312 aa22.68■■□□□ 1.22
DDR1-279ENST00000515529 RADILQ96JH8 1075 aa22.68■■□□□ 1.22
DDR1-279ENST00000515529 IFT27Q9BW83 186 aa22.68■■□□□ 1.22
DDR1-279ENST00000515529 NRIP3Q9NQ35 241 aa22.68■■□□□ 1.22
DDR1-279ENST00000515529 TMEM38BQ9NVV0 291 aa22.68■■□□□ 1.22
DDR1-279ENST00000515529 DNAJB9Q9UBS3 223 aa22.68■■□□□ 1.22
DDR1-279ENST00000515529 ST6GALNAC2Q9UJ37 374 aa22.68■■□□□ 1.22
DDR1-279ENST00000515529 SLC2A10O95528 541 aa22.67■■□□□ 1.22
DDR1-279ENST00000515529 GASTP01350 101 aa22.67■■□□□ 1.22
DDR1-279ENST00000515529 OR8G3PP0DMU2 310 aa22.67■■□□□ 1.22
DDR1-279ENST00000515529 GSTM3P21266 225 aa22.67■■□□□ 1.22
DDR1-279ENST00000515529 SDHAP31040 664 aa22.67■■□□□ 1.22
DDR1-279ENST00000515529 GUCA1AP43080 201 aaPredicted RBP22.67■■□□□ 1.22
DDR1-279ENST00000515529 C10orf128Q5T292 105 aa22.67■■□□□ 1.22
DDR1-279ENST00000515529 SLC22A25Q6T423 547 aa22.67■■□□□ 1.22
DDR1-279ENST00000515529 PAMR1Q6UXH9 720 aa22.67■■□□□ 1.22
DDR1-279ENST00000515529 ZNF620Q6ZNG0 422 aa22.67■■□□□ 1.22
DDR1-279ENST00000515529 SLC22A24Q8N4F4 322 aa22.67■■□□□ 1.22
DDR1-279ENST00000515529 NSMAFQ92636 917 aa22.67■■□□□ 1.22
DDR1-279ENST00000515529 AKAP1Q92667 903 aaKnown RBP eCLIP22.67■■□□□ 1.22
DDR1-279ENST00000515529 GTPBP3Q969Y2 492 aaKnown RBP22.67■■□□□ 1.22
DDR1-279ENST00000515529 ERMAPQ96PL5 475 aaPredicted RBP22.67■■□□□ 1.22
DDR1-279ENST00000515529 SLC38A2Q96QD8 506 aa22.67■■□□□ 1.22
DDR1-279ENST00000515529 LIME1Q9H400 295 aa22.67■■□□□ 1.22
DDR1-279ENST00000515529 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.67■■□□□ 1.22
DDR1-279ENST00000515529 POU2F3Q9UKI9 436 aa22.67■■□□□ 1.22
DDR1-279ENST00000515529 AHCYL1O43865 530 aa22.66■■□□□ 1.22
DDR1-279ENST00000515529 DEAF1O75398 565 aaPredicted RBP22.66■■□□□ 1.22
DDR1-279ENST00000515529 PPP1R3DO95685 299 aa22.66■■□□□ 1.22
DDR1-279ENST00000515529 RAF1P04049 648 aa22.66■■□□□ 1.22
DDR1-279ENST00000515529 NOS3P29474 1203 aa22.66■■□□□ 1.22
DDR1-279ENST00000515529 ARR3P36575 388 aa22.66■■□□□ 1.22
DDR1-279ENST00000515529 ARHGDIAP52565 204 aa22.66■■□□□ 1.22
DDR1-279ENST00000515529 FXYD6P3P58550 94 aa22.66■■□□□ 1.22
DDR1-279ENST00000515529 FMODQ06828 376 aa22.66■■□□□ 1.22
DDR1-279ENST00000515529 ZNF770Q6IQ21 691 aaPredicted RBP22.66■■□□□ 1.22
DDR1-279ENST00000515529 C20orf204Q6ZNR8 217 aa22.66■■□□□ 1.22
DDR1-279ENST00000515529 FAM122BQ7Z309 247 aa22.66■■□□□ 1.22
DDR1-279ENST00000515529 RASD2Q96D21 266 aa22.66■■□□□ 1.22
DDR1-279ENST00000515529 SAMD8Q96LT4 415 aa22.66■■□□□ 1.22
DDR1-279ENST00000515529 PLEKHA6Q9Y2H5 1048 aa22.66■■□□□ 1.22
DDR1-279ENST00000515529 CDH10Q9Y6N8 788 aa22.66■■□□□ 1.22
DDR1-279ENST00000515529 H7C1C5 153 aa22.65■■□□□ 1.22
DDR1-279ENST00000515529 SOCS2O14508 198 aa22.65■■□□□ 1.22
DDR1-279ENST00000515529 HS3ST1O14792 307 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms