RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 RBM39Q14498 530 aaKnown RBP12.07□□□□□ -0.48
TCOF1-213ENST00000514442 COL19A1Q14993 1142 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 MFSD13AQ14CX5 517 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 LILRA6Q6PI73 481 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 RBM45Q8IUH3 476 aaKnown RBP12.07□□□□□ -0.48
TCOF1-213ENST00000514442 OR6T1Q8NGN1 323 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 OR52I2Q8NH67 350 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 ZNF337Q9Y3M9 751 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 P2RX6O15547 441 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 ZNF264O43296 627 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 SYT7O43581 403 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 OR2T1O43869 369 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 TMPRSS11DO60235 418 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 F10P00742 488 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 SOX18P35713 384 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 VASPP50552 380 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-213ENST00000514442 HERV-K104P61576 105 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 LTBQ06643 244 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 KIAA0141Q14154 515 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-213ENST00000514442 FAM71CQ8NEG0 241 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 RAB3CQ96E17 227 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 MEPEQ9NQ76 525 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-213ENST00000514442 YBX2Q9Y2T7 364 aaKnown RBP12.07□□□□□ -0.48
TCOF1-213ENST00000514442 IGHV3-20A0A0C4DH32 117 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 DCDC2BA2VCK2 349 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 ETHE1O95571 254 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 CXCL3P19876 107 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 ACHEP22303 614 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 TAS2R31P59538 309 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 SLC14A1Q13336 389 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 TRMT12Q53H54 448 aaKnown RBP12.07□□□□□ -0.48
TCOF1-213ENST00000514442 MED25Q71SY5 747 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 TMEM255BQ8WV15 326 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 SEC22AQ96IW7 307 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 TAS2R5Q9NYW4 299 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 MMP11P24347 488 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 CRABP1P29762 137 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 POU3F1Q03052 451 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-213ENST00000514442 HYAL1Q12794 435 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 LAIR2Q6ISS4 152 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 ADAM5Q6NVV9 412 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 Q6ZS52 159 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 GLRX5Q86SX6 157 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 CCDC71Q8IV32 467 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-213ENST00000514442 OR14A16Q8NHC5 309 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 HOXB13Q92826 284 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-213ENST00000514442 ZNF775Q96BV0 537 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-213ENST00000514442 PRRT1Q99946 306 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 OPA3Q9H6K4 179 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 ZNF225Q9UK10 706 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 KPTNQ9Y664 436 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 A6NLC8 198 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 TNFRSF10CO14798 259 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 VAMP2P63027 116 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 EEF1A1P68104 462 aaKnown RBP12.07□□□□□ -0.48
TCOF1-213ENST00000514442 CHRFAM7AQ494W8 412 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 MFSD12Q6NUT3 480 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 RPL22L1Q6P5R6 122 aaKnown RBP12.07□□□□□ -0.48
TCOF1-213ENST00000514442 FIP1L1Q6UN15 594 aaKnown RBP12.07□□□□□ -0.48
TCOF1-213ENST00000514442 SFT2D1Q8WV19 159 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 ARSGQ96EG1 525 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 INTS14Q96SY0 518 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 PLA2G2FQ9BZM2 168 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 KCNIP3Q9Y2W7 256 aa12.07□□□□□ -0.48
TCOF1-213ENST00000514442 A0A1W2PR48 441 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 BLACEA4D250 179 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 SLC2A5P22732 501 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 TACR3P29371 465 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 DAP3P51398 398 aaKnown RBP12.06□□□□□ -0.48
TCOF1-213ENST00000514442 ARG2P78540 354 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 MRPL49Q13405 166 aaKnown RBP12.06□□□□□ -0.48
TCOF1-213ENST00000514442 MEF2DQ14814 521 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 GLDNQ6ZMI3 551 aaPredicted RBP12.06□□□□□ -0.48
TCOF1-213ENST00000514442 DEFB123Q8N688 67 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 SUMF2Q8NBJ7 301 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 CCNL2Q96S94 520 aaPredicted RBP12.06□□□□□ -0.48
TCOF1-213ENST00000514442 CMSS1Q9BQ75 279 aaKnown RBP12.06□□□□□ -0.48
TCOF1-213ENST00000514442 ACKR4Q9NPB9 350 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 A4GALTQ9NPC4 353 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 CHST2Q9Y4C5 530 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 GJE1A6NN92 205 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 SOCS6O14544 535 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 ZNF749O43361 778 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 LIPCP11150 499 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 GLO1Q04760 184 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 GXYLT1Q4G148 440 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 ACSM5Q6NUN0 579 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 STPG2Q8N412 459 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 AKR7LQ8NHP1 331 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 TNFRSF13CQ96RJ3 184 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.06□□□□□ -0.48
TCOF1-213ENST00000514442 ADAM18Q9Y3Q7 739 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 SERINC4A6NH21 518 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 PLRG1O43660 514 aaKnown RBP12.06□□□□□ -0.48
TCOF1-213ENST00000514442 CSF2RBP32927 897 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 BDH1Q02338 343 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 AWAT2Q6E213 333 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 VASNQ6EMK4 673 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 LPCAT3Q6P1A2 487 aa12.06□□□□□ -0.48
TCOF1-213ENST00000514442 SPICQ8N5J4 248 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms