RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 TMEM239Q8WW34 195 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 FAM46AQ96IP4 442 aaKnown RBP7.39□□□□□ -1.23
CCL28-204ENST00000514421 JAM3Q9BX67 310 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 PRRG3Q9BZD7 231 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 PLA2G12AQ9BZM1 189 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 SLC19A3Q9BZV2 496 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 NAA50Q9GZZ1 169 aaKnown RBP7.39□□□□□ -1.23
CCL28-204ENST00000514421 OPN3Q9H1Y3 402 aaPredicted RBP7.39□□□□□ -1.23
CCL28-204ENST00000514421 BCO1Q9HAY6 547 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 FGF20Q9NP95 211 aaPredicted RBP7.39□□□□□ -1.23
CCL28-204ENST00000514421 KLHL13Q9P2N7 655 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 LSM2Q9Y333 95 aaKnown RBP7.39□□□□□ -1.23
CCL28-204ENST00000514421 RPL36Q9Y3U8 105 aaKnown RBP7.39□□□□□ -1.23
CCL28-204ENST00000514421 CDH10Q9Y6N8 788 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 SETXQ7Z333 2677 aaKnown RBP7.39□□□□□ -1.23
CCL28-204ENST00000514421 ABCA4P78363 2273 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 ALPK2Q86TB3 2170 aa7.39□□□□□ -1.23
CCL28-204ENST00000514421 ANKHD1Q8IWZ3 2542 aaKnown RBP7.38□□□□□ -1.23
CCL28-204ENST00000514421 SPG11Q96JI7 2443 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 IGKV3D-15A0A087WSY6 115 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 IRGMA1A4Y4 181 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 ENO4A6NNW6 628 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 M0R082 166 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 BHLHE40O14503 412 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 CDC42EP2O14613 210 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 SURF4O15260 269 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 PRODHO43272 600 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 PTP4A3O75365 173 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 VAMP5O95183 116 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 AHSA1O95433 338 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 ADRA2AP08913 450 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 ADORA3P0DMS8 318 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 DBTP11182 482 aaKnown RBP7.38□□□□□ -1.23
CCL28-204ENST00000514421 KLK2P20151 261 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 POU1F1P28069 291 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 AGTR1P30556 359 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 CD79BP40259 229 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 KIR2DL3P43628 341 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 MAP2K4P45985 399 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 SLC16A1P53985 500 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 FXYD6P3P58550 94 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 EGR4Q05215 589 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 ZNF91Q05481 1191 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 FAM27E3Q08E93 113 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 DYNC1I2Q13409 638 aaKnown RBP7.38□□□□□ -1.23
CCL28-204ENST00000514421 FHL1Q13642 323 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 AADACL4Q5VUY2 407 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 TMEM225Q6GV28 225 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 PAQR6Q6TCH4 344 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 BEND4Q6ZU67 534 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 ZNF367Q7RTV3 350 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 NUFIP2Q7Z417 695 aaKnown RBP7.38□□□□□ -1.23
CCL28-204ENST00000514421 LNX2Q8N448 690 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 TMEM99Q8N816 258 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 TCEANCQ8N8B7 351 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 OR6S1Q8NH40 331 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 LIPHQ8WWY8 451 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 TAAR8Q969N4 342 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 ZNF775Q96BV0 537 aaPredicted RBP7.38□□□□□ -1.23
CCL28-204ENST00000514421 SLC25A36Q96CQ1 311 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 KTI12Q96EK9 354 aaPredicted RBP7.38□□□□□ -1.23
CCL28-204ENST00000514421 DNAJA3Q96EY1 480 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 ZNF582Q96NG8 517 aaPredicted RBP7.38□□□□□ -1.23
CCL28-204ENST00000514421 SLC38A2Q96QD8 506 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 TMEM43Q9BTV4 400 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 SF3B5Q9BWJ5 86 aaKnown RBP7.38□□□□□ -1.23
CCL28-204ENST00000514421 CCDC90BQ9GZT6 254 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 FN3KQ9H479 309 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 EGLN3Q9H6Z9 239 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 MEPEQ9NQ76 525 aaPredicted RBP7.38□□□□□ -1.23
CCL28-204ENST00000514421 PARPBPQ9NWS1 579 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 EMC3Q9P0I2 261 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 KCNN3Q9UGI6 736 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 ING1Q9UK53 422 aaPredicted RBP7.38□□□□□ -1.23
CCL28-204ENST00000514421 DIMT1Q9UNQ2 313 aaKnown RBP7.38□□□□□ -1.23
CCL28-204ENST00000514421 SIGLEC7Q9Y286 467 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 ARHGAP21Q5T5U3 1957 aa7.38□□□□□ -1.23
CCL28-204ENST00000514421 UNC79Q9P2D8 2635 aa7.37□□□□□ -1.23
CCL28-204ENST00000514421 KIAA1549Q9HCM3 1950 aa7.37□□□□□ -1.23
CCL28-204ENST00000514421 ADGRG4Q8IZF6 3080 aa7.37□□□□□ -1.23
CCL28-204ENST00000514421 IGKV1D-42A0A075B6H8 117 aa7.37□□□□□ -1.23
CCL28-204ENST00000514421 TRAV36DV7A0A075B6V5 113 aa7.37□□□□□ -1.23
CCL28-204ENST00000514421 TUBAL3A6NHL2 446 aa7.37□□□□□ -1.23
CCL28-204ENST00000514421 UNC119BA6NIH7 251 aa7.37□□□□□ -1.23
CCL28-204ENST00000514421 AQP7P3A6NL99 342 aa7.37□□□□□ -1.23
CCL28-204ENST00000514421 ZNF716A6NP11 495 aa7.37□□□□□ -1.23
CCL28-204ENST00000514421 FTCDNL1E5RQL4 147 aa7.37□□□□□ -1.23
CCL28-204ENST00000514421 C16orf97H3BN30 126 aa7.37□□□□□ -1.23
CCL28-204ENST00000514421 M0R129 80 aa7.37□□□□□ -1.23
CCL28-204ENST00000514421 NOL3O60936 208 aaKnown RBP7.37□□□□□ -1.23
CCL28-204ENST00000514421 AKR7A3O95154 331 aa7.37□□□□□ -1.23
CCL28-204ENST00000514421 FADS2O95864 444 aaKnown RBP7.37□□□□□ -1.23
CCL28-204ENST00000514421 HMGN1P05114 100 aa7.37□□□□□ -1.23
CCL28-204ENST00000514421 LCKP06239 509 aa7.37□□□□□ -1.23
CCL28-204ENST00000514421 INHBBP09529 407 aa7.37□□□□□ -1.23
CCL28-204ENST00000514421 TSPAN19P0C672 248 aa7.37□□□□□ -1.23
CCL28-204ENST00000514421 EPXP11678 715 aa7.37□□□□□ -1.23
CCL28-204ENST00000514421 MAKP20794 623 aa7.37□□□□□ -1.23
CCL28-204ENST00000514421 GRK5P34947 590 aa7.37□□□□□ -1.23
CCL28-204ENST00000514421 RPS5P46782 204 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms