RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 GOSR1O95249 250 aa17.78■□□□□ 0.44
USP53-208ENST00000514305 CGAP01215 116 aa17.78■□□□□ 0.44
USP53-208ENST00000514305 ACADSP16219 412 aa17.78■□□□□ 0.44
USP53-208ENST00000514305 IGFBP5P24593 272 aa17.78■□□□□ 0.44
USP53-208ENST00000514305 ACVR1BP36896 505 aa17.78■□□□□ 0.44
USP53-208ENST00000514305 CSNK1A1P48729 337 aa17.78■□□□□ 0.44
USP53-208ENST00000514305 DAPP51397 102 aa17.78■□□□□ 0.44
USP53-208ENST00000514305 ITGADQ13349 1161 aa17.78■□□□□ 0.44
USP53-208ENST00000514305 TOP3AQ13472 1001 aaPredicted RBP17.78■□□□□ 0.44
USP53-208ENST00000514305 P2RY6Q15077 328 aa17.78■□□□□ 0.44
USP53-208ENST00000514305 KLHL17Q6TDP4 642 aa17.78■□□□□ 0.44
USP53-208ENST00000514305 TFAP2EQ6VUC0 442 aa17.78■□□□□ 0.44
USP53-208ENST00000514305 Q6ZT83 130 aa17.78■□□□□ 0.44
USP53-208ENST00000514305 LUZP2Q86TE4 346 aa17.78■□□□□ 0.44
USP53-208ENST00000514305 ARIH2OSQ8N7S6 290 aa17.78■□□□□ 0.44
USP53-208ENST00000514305 ZNF610Q8N9Z0 462 aa17.78■□□□□ 0.44
USP53-208ENST00000514305 LRRC75AQ8NAA5 344 aa17.78■□□□□ 0.44
USP53-208ENST00000514305 LINC01560Q8TB33 94 aa17.78■□□□□ 0.44
USP53-208ENST00000514305 ASB10Q8WXI3 467 aa17.78■□□□□ 0.44
USP53-208ENST00000514305 ERMAPQ96PL5 475 aaPredicted RBP17.78■□□□□ 0.44
USP53-208ENST00000514305 RBP7Q96R05 134 aa17.78■□□□□ 0.44
USP53-208ENST00000514305 OR2M2Q96R28 347 aa17.78■□□□□ 0.44
USP53-208ENST00000514305 CIB1Q99828 191 aa17.78■□□□□ 0.44
USP53-208ENST00000514305 ALG12Q9BV10 488 aa17.78■□□□□ 0.44
USP53-208ENST00000514305 TSSK6Q9BXA6 273 aa17.78■□□□□ 0.44
USP53-208ENST00000514305 ZNF587BE7ETH6 402 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 ZNF432O94892 652 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 IFNGP01579 166 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 HMGN1P05114 100 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 POU1F1P28069 291 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 GUCA1AP43080 201 aaPredicted RBP17.77■□□□□ 0.44
USP53-208ENST00000514305 SELENOPP49908 381 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 ALDH3A2P51648 485 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 ERVK-25P63136 954 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 RIPK1Q13546 671 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 CAMK2DQ13557 499 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 FHL1Q13642 323 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 DAG1Q14118 895 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 TRIP10Q15642 601 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 KDM4DQ6B0I6 523 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 SLC27A4Q6P1M0 643 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 ADCK1Q86TW2 530 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 IGFN1Q86VF2 1251 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 JAZF1Q86VZ6 243 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 TGIF2LYQ8IUE0 185 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 TXNDC15Q96J42 360 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 EMC6Q9BV81 110 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 EGLN3Q9H6Z9 239 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 USE1Q9NZ43 259 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 RRP15Q9Y3B9 282 aaKnown RBP17.77■□□□□ 0.44
USP53-208ENST00000514305 IER3IP1Q9Y5U9 82 aa17.77■□□□□ 0.44
USP53-208ENST00000514305 MAGED1Q9Y5V3 778 aaPredicted RBP17.77■□□□□ 0.44
USP53-208ENST00000514305 SETD2Q9BYW2 2564 aaPredicted RBP17.77■□□□□ 0.43
USP53-208ENST00000514305 PRRC2AP48634 2157 aaKnown RBP17.76■□□□□ 0.43
USP53-208ENST00000514305 TXNDC12O95881 172 aa17.76■□□□□ 0.43
USP53-208ENST00000514305 PPP2R2BQ00005 443 aa17.76■□□□□ 0.43
USP53-208ENST00000514305 SLC34A1Q06495 639 aa17.76■□□□□ 0.43
USP53-208ENST00000514305 MELKQ14680 651 aa17.76■□□□□ 0.43
USP53-208ENST00000514305 STK11Q15831 433 aa17.76■□□□□ 0.43
USP53-208ENST00000514305 SLC36A3Q495N2 470 aa17.76■□□□□ 0.43
USP53-208ENST00000514305 PAMR1Q6UXH9 720 aa17.76■□□□□ 0.43
USP53-208ENST00000514305 NHLRC1Q6VVB1 395 aa17.76■□□□□ 0.43
USP53-208ENST00000514305 MAGEE2Q8TD90 523 aaPredicted RBP17.76■□□□□ 0.43
USP53-208ENST00000514305 OPN3Q9H1Y3 402 aaPredicted RBP17.76■□□□□ 0.43
USP53-208ENST00000514305 VCX3BQ9H321 246 aa17.76■□□□□ 0.43
USP53-208ENST00000514305 RNPEPL1Q9HAU8 725 aa17.76■□□□□ 0.43
USP53-208ENST00000514305 GALNT8Q9NY28 637 aa17.76■□□□□ 0.43
USP53-208ENST00000514305 MALT1Q9UDY8 824 aa17.76■□□□□ 0.43
USP53-208ENST00000514305 KLHL21Q9UJP4 597 aa17.76■□□□□ 0.43
USP53-208ENST00000514305 PDLIM1O00151 329 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 ARHGEF9O43307 516 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 TRMUO75648 421 aaKnown RBP17.75■□□□□ 0.43
USP53-208ENST00000514305 SOX14O95416 240 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 PPP1R3DO95685 299 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 RENP00797 406 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 RAF1P04049 648 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 CRISP1P54107 249 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 SH3BGRP55822 239 aaPredicted RBP17.75■□□□□ 0.43
USP53-208ENST00000514305 PRR20EP86478 221 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 PRR20CP86479 221 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 PRR20DP86480 221 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 PRR20BP86481 221 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 PRR20AP86496 221 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 MYBPC1Q00872 1141 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 FAPQ12884 760 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 KEAP1Q14145 624 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 CLEC12AQ5QGZ9 265 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 THEM4Q5T1C6 240 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 ARMC4Q5T2S8 1044 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 TSPO2Q5TGU0 170 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 CARD17Q5XLA6 110 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 DNM1P34Q6PK57 102 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 SSX8Q7RTT4 187 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 C20orf196Q8IYI0 205 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 CBR4Q8N4T8 237 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 PACRGLQ8N7B6 248 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 RDH12Q96NR8 316 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 TSPAN32Q96QS1 320 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 SNX18Q96RF0 628 aa17.75■□□□□ 0.43
USP53-208ENST00000514305 ULBP2Q9BZM5 246 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms