RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 NHLRC1Q6VVB1 395 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 TRILQ7L0X0 811 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 NR2C2APQ86WQ0 139 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 OR5M1Q8NGP8 315 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 OR13C5Q8NGS8 318 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 OTOSQ8NHW6 89 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 C5orf34Q96MH7 638 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 KCNK17Q96T54 332 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 FAM117AQ9C073 453 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 TBCCD1Q9NVR7 557 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 B3GAT1Q9P2W7 334 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 RPH3AQ9Y2J0 694 aaPredicted RBP13.41□□□□□ -0.26
VCAN-211ENST00000513984 HDGFL3Q9Y3E1 203 aa13.41□□□□□ -0.26
VCAN-211ENST00000513984 PSMD9O00233 223 aa13.4□□□□□ -0.26
VCAN-211ENST00000513984 GATBO75879 557 aaKnown RBP13.4□□□□□ -0.26
VCAN-211ENST00000513984 KRT8P05787 483 aa13.4□□□□□ -0.26
VCAN-211ENST00000513984 OR8G3PP0DMU2 310 aa13.4□□□□□ -0.26
VCAN-211ENST00000513984 PSKH1P11801 424 aa13.4□□□□□ -0.26
VCAN-211ENST00000513984 TCEA1P23193 301 aaKnown RBP13.4□□□□□ -0.26
VCAN-211ENST00000513984 DPP4P27487 766 aa13.4□□□□□ -0.26
VCAN-211ENST00000513984 DSCR4P56555 118 aaPredicted RBP13.4□□□□□ -0.26
VCAN-211ENST00000513984 PPP3R1P63098 170 aa13.4□□□□□ -0.26
VCAN-211ENST00000513984 CSRP2Q16527 193 aa13.4□□□□□ -0.26
VCAN-211ENST00000513984 TRIM16LQ309B1 348 aa13.4□□□□□ -0.26
VCAN-211ENST00000513984 HBMQ6B0K9 141 aa13.4□□□□□ -0.26
VCAN-211ENST00000513984 GLRX5Q86SX6 157 aa13.4□□□□□ -0.26
VCAN-211ENST00000513984 PIP4P1Q86T03 277 aa13.4□□□□□ -0.26
VCAN-211ENST00000513984 FAM83FQ8NEG4 500 aaPredicted RBP13.4□□□□□ -0.26
VCAN-211ENST00000513984 OR1J4Q8NGS1 313 aa13.4□□□□□ -0.26
VCAN-211ENST00000513984 TSPAN10Q9H1Z9 355 aaPredicted RBP13.4□□□□□ -0.26
VCAN-211ENST00000513984 TMEM185BQ9H7F4 350 aa13.4□□□□□ -0.26
VCAN-211ENST00000513984 MRPL22Q9NWU5 206 aaKnown RBP13.4□□□□□ -0.26
VCAN-211ENST00000513984 TRAV1-2A0A0B4J238 106 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 CENPBD1B2RD01 187 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 UCHL1P09936 223 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 DLSTP36957 453 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 NANOS3P60323 173 aaKnown RBP13.39□□□□□ -0.27
VCAN-211ENST00000513984 ZNF79Q15937 498 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 LIPNQ5VXI9 398 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 TIGD3Q6B0B8 471 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 DNM1P34Q6PK57 102 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 UNQ9370/PRO34162Q6UXP9 181 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 YIPF7Q8N8F6 280 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 ACOT12Q8WYK0 555 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 PHYHIPQ92561 330 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 OR5B2Q96R09 309 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 UBL7Q96S82 380 aaPredicted RBP13.39□□□□□ -0.27
VCAN-211ENST00000513984 PDCD1LG2Q9BQ51 273 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 SACM1LQ9NTJ5 587 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 KCNG2Q9UJ96 466 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 A0A1W2PNR3 127 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 ZNF593O00488 134 aaPredicted RBP13.39□□□□□ -0.27
VCAN-211ENST00000513984 SEC14L5O43304 696 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 HLA-DQA2P01906 255 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 PTGS2P35354 604 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 RPS27P42677 84 aaKnown RBP13.39□□□□□ -0.27
VCAN-211ENST00000513984 GLO1Q04760 184 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 TRIP6Q15654 476 aaKnown RBP13.39□□□□□ -0.27
VCAN-211ENST00000513984 ETFDHQ16134 617 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 B3GNTL1Q67FW5 361 aaPredicted RBP13.39□□□□□ -0.27
VCAN-211ENST00000513984 MZT2AQ6P582 158 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 MDGA2Q7Z553 956 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 WDFY1Q8IWB7 410 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 ASB17Q8WXJ9 295 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 MIB2Q96AX9 1013 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 GNRHR2Q96P88 292 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 MFRPQ9BY79 579 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 B3GNT4Q9C0J1 378 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 SRRQ9GZT4 340 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 PARD6AQ9NPB6 346 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 MED29Q9NX70 200 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 KLHL13Q9P2N7 655 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 ZNF281Q9Y2X9 895 aa13.39□□□□□ -0.27
VCAN-211ENST00000513984 A0A0G2JK05 382 aa13.38□□□□□ -0.27
VCAN-211ENST00000513984 ARL6IP5O75915 188 aa13.38□□□□□ -0.27
VCAN-211ENST00000513984 ZNF17P17021 662 aa13.38□□□□□ -0.27
VCAN-211ENST00000513984 SFTPDP35247 375 aa13.38□□□□□ -0.27
VCAN-211ENST00000513984 OR2B6P58173 313 aa13.38□□□□□ -0.27
VCAN-211ENST00000513984 ALKBH1Q13686 389 aaKnown RBP13.38□□□□□ -0.27
VCAN-211ENST00000513984 C11orf91Q3C1V1 193 aa13.38□□□□□ -0.27
VCAN-211ENST00000513984 TMEM176BQ3YBM2 270 aaPredicted RBP13.38□□□□□ -0.27
VCAN-211ENST00000513984 YIF1BQ5BJH7 314 aa13.38□□□□□ -0.27
VCAN-211ENST00000513984 ACER2Q5QJU3 275 aa13.38□□□□□ -0.27
VCAN-211ENST00000513984 THEM6Q8WUY1 208 aa13.38□□□□□ -0.27
VCAN-211ENST00000513984 HSD17B8Q92506 261 aa13.38□□□□□ -0.27
VCAN-211ENST00000513984 PSMF1Q92530 271 aa13.38□□□□□ -0.27
VCAN-211ENST00000513984 KIAA1143Q96AT1 154 aaPredicted RBP13.38□□□□□ -0.27
VCAN-211ENST00000513984 KCTD12Q96CX2 325 aaKnown RBP13.38□□□□□ -0.27
VCAN-211ENST00000513984 DIRAS2Q96HU8 199 aa13.38□□□□□ -0.27
VCAN-211ENST00000513984 TXNDC15Q96J42 360 aa13.38□□□□□ -0.27
VCAN-211ENST00000513984 MAP6Q96JE9 813 aa13.38□□□□□ -0.27
VCAN-211ENST00000513984 AMELYQ99218 206 aa13.38□□□□□ -0.27
VCAN-211ENST00000513984 TTYH2Q9BSA4 534 aa13.38□□□□□ -0.27
VCAN-211ENST00000513984 COMMD3Q9UBI1 195 aa13.38□□□□□ -0.27
VCAN-211ENST00000513984 IKZF2Q9UKS7 526 aa13.38□□□□□ -0.27
VCAN-211ENST00000513984 G3V3Y1 287 aa13.37□□□□□ -0.27
VCAN-211ENST00000513984 ZIC3O60481 467 aa13.37□□□□□ -0.27
VCAN-211ENST00000513984 RAD1O60671 282 aa13.37□□□□□ -0.27
VCAN-211ENST00000513984 LRP3O75074 770 aa13.37□□□□□ -0.27
VCAN-211ENST00000513984 CBR3O75828 277 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms