RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 CIB4A0PJX0 185 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 C16orf97H3BN30 126 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 H3BN98 237 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 EI24O14681 340 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 ACADSP16219 412 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 IGFBP2P18065 325 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 PSMB1P20618 241 aaKnown RBP8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 MPGP29372 298 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 SDHAP31040 664 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 ELF3P78545 371 aaPredicted RBP8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 ARF1P84077 181 aaKnown RBP8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 ITGADQ13349 1161 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 GK3PQ14409 553 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 ANKDD1AQ495B1 522 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 FAHD1Q6P587 224 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 KLHL24Q6TFL4 600 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 PTCHD4Q6ZW05 846 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 HIPK1Q86Z02 1210 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 WFDC8Q8IUA0 241 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 ZNF433Q8N7K0 673 aaPredicted RBP8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 POMGNT2Q8NAT1 580 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 OR52L1Q8NGH7 329 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 OR52N5Q8NH56 324 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 TEX47Q8TBZ9 253 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 LRRC46Q96FV0 321 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 ADAD1Q96M93 576 aaKnown RBP8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 WFIKKN1Q96NZ8 548 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 CIB1Q99828 191 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 TSSK6Q9BXA6 273 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 LINC00470Q9BZP3 86 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 NDEL1Q9GZM8 345 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 GABARAPL1Q9H0R8 117 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 NELFAQ9H3P2 528 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 RERGLQ9H628 205 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 NRIP3Q9NQ35 241 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 ELOVL5Q9NYP7 299 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 TAS2R16Q9NYV7 291 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 GLTPQ9NZD2 209 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 GRHPRQ9UBQ7 328 aa8.61□□□□□ -1.03
TOPBP1-209ENST00000513818 HRNRQ86YZ3 2850 aaPredicted RBP8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 FBN2P35556 2912 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 SH3D21A4FU49 640 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 TUBAL3A6NHL2 446 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 NPIPB13A6NJU9 1138 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 NPIPB4C9JG80 1138 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 M0R129 80 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 GPANK1O95872 356 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 THBDP07204 575 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 QDPRP09417 244 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 ANXA8P13928 327 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 ANPEPP15144 967 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 B4GALT1P15291 398 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 HIST1H1CP16403 213 aaKnown RBP8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 GSTM3P21266 225 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 IGFBP5P24593 272 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 CDAP32320 146 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 KIR2DL3P43628 341 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 RPS6KA3P51812 740 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 ARHGDIAP52565 204 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 SORDQ00796 357 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 TAB1Q15750 504 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 ETFDHQ16134 617 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 GABRA6Q16445 453 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 PGGHGQ32M88 737 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 TMEM236Q5W0B7 351 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 SP5Q6BEB4 398 aaPredicted RBP8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 LEG1Q6P5S2 330 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 LRFN4Q6PJG9 635 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 DPY19L2P2Q6ZN68 376 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 ZDHHC13Q8IUH4 622 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 DMRTC2Q8IXT2 367 aaPredicted RBP8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 SVOPLQ8N434 492 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 ARIH2OSQ8N7S6 290 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 CYB561A3Q8NBI2 242 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 OR1K1Q8NGR3 316 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 OR4K13Q8NH42 304 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 MCHR2Q969V1 340 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 NMD3Q96D46 503 aaKnown RBP8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 NRBF2Q96F24 287 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 NMNAT3Q96T66 252 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 MED18Q9BUE0 208 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 MRPL13Q9BYD1 178 aaKnown RBP8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 SYT4Q9H2B2 425 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 ZNF556Q9HAH1 456 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 PAPOLBQ9NRJ5 636 aaKnown RBP8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 KRT84Q9NSB2 600 aa8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 TMEFF2Q9UIK5 374 aaPredicted RBP8.6□□□□□ -1.03
TOPBP1-209ENST00000513818 NBPF19A0A087WUL8 3843 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 A0A1W2PPL8 197 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 SLC22A23A1A5C7 686 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 PRSS37A4D1T9 235 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 ZNF503-AS2A6NEH8 195 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 A6NIZ1 184 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 BHLHE40O14503 412 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 XKRYO14609 159 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 SIAH2O43255 324 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 CNOT4O95628 575 aaKnown RBP8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 OSMP13725 252 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 COX6B1P14854 86 aa8.59□□□□□ -1.03
TOPBP1-209ENST00000513818 CTLA4P16410 223 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms