RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 TTPAP49638 278 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 KPNA2P52292 529 aaKnown RBP3.34□□□□□ -1.87
HTT-210ENST00000512909 ZNF140P52738 457 aaPredicted RBP3.34□□□□□ -1.87
HTT-210ENST00000512909 PPP1CAP62136 330 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 GABPB1Q06547 395 aaPredicted RBP3.34□□□□□ -1.87
HTT-210ENST00000512909 COX10Q12887 443 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 ITIH4Q14624 930 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 SLC22A6Q4U2R8 563 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 BCL7AQ4VC05 210 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 NHLRC3Q5JS37 347 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 SLX4IPQ5VYV7 408 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 LRRC8BQ6P9F7 803 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 FAM159AQ6UWV7 190 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 WASH2PQ6VEQ5 465 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 LRRC70Q7Z2Q7 622 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 CEACAM19Q7Z692 300 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 ELMOD2Q8IZ81 293 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 RNF148Q8N7C7 305 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 MAPK1IP1LQ8NDC0 245 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 OR56B1Q8NGI3 324 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 DTX3LQ8TDB6 740 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 ASZ1Q8WWH4 475 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 RAB3CQ96E17 227 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 CCDC28BQ9BUN5 200 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 DDA1Q9BW61 102 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 DPH5Q9H2P9 285 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 ALG9Q9H6U8 611 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 COG4Q9H9E3 785 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 UCK1Q9HA47 277 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 ADGRL4Q9HBW9 690 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 STARD5Q9NSY2 213 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 ABCD2Q9UBJ2 740 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 GHRLQ9UBU3 117 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 GNPTGQ9UJJ9 305 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 MRPS18BQ9Y676 258 aaKnown RBP3.34□□□□□ -1.87
HTT-210ENST00000512909 TMEM131Q92545 1883 aa3.34□□□□□ -1.87
HTT-210ENST00000512909 PLXND1Q9Y4D7 1925 aa3.34□□□□□ -1.88
HTT-210ENST00000512909 PIEZO1Q92508 2521 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 NYNRINQ9P2P1 1898 aaKnown RBP3.33□□□□□ -1.88
HTT-210ENST00000512909 TRPM6Q9BX84 2022 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 TDRD6O60522 2096 aaKnown RBP3.33□□□□□ -1.88
HTT-210ENST00000512909 FAM230AA0A1W2PPH8 454 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 TLCD2A6NGC4 264 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 ARGFXA6NJG6 315 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 ANKRD30BLA7E2S9 258 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 E7EQ34 232 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 H3BTX0 84 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 PRMT5O14744 637 aaPredicted RBP3.33□□□□□ -1.88
HTT-210ENST00000512909 TOX3O15405 576 aaPredicted RBP3.33□□□□□ -1.88
HTT-210ENST00000512909 LCMT2O60294 686 aaKnown RBP3.33□□□□□ -1.88
HTT-210ENST00000512909 OR2B3O76000 313 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 SERPIND1P05546 499 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 ANXA4P09525 319 aaPredicted RBP3.33□□□□□ -1.88
HTT-210ENST00000512909 GATA1P15976 413 aaPredicted RBP3.33□□□□□ -1.88
HTT-210ENST00000512909 TSPAN8P19075 237 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 PRDX2P32119 198 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 OTX2P32243 289 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 FOXN2P32314 431 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 RPA3P35244 121 aaPredicted RBP3.33□□□□□ -1.88
HTT-210ENST00000512909 BDKRB1P46663 353 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 CAPZBP47756 277 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 CD151P48509 253 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 PRLHRP49683 370 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 EMDP50402 254 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 IST1P53990 364 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 MRPS25P82663 173 aaKnown RBP3.33□□□□□ -1.88
HTT-210ENST00000512909 CDK16Q00536 496 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 IL1RL1Q01638 556 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 PLOD1Q02809 727 aaPredicted RBP3.33□□□□□ -1.88
HTT-210ENST00000512909 PPP1R3AQ16821 1122 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 MICAQ29983 383 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 DEFB110Q30KQ9 67 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 LINC00303Q3SY05 128 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 EIPR1Q53HC9 387 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 DNAJC21Q5F1R6 531 aaKnown RBP3.33□□□□□ -1.88
HTT-210ENST00000512909 ANKRD22Q5VYY1 191 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 FAM219BQ5XKK7 198 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 OLFML2AQ68BL7 652 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 PLBD1Q6P4A8 553 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 PRSS58Q8IYP2 241 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 TBC1D21Q8IYX1 336 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 PRELID2Q8N945 189 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 ZNRF1Q8ND25 227 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 VN1R17PQ8TDU5 208 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 CT55Q8WUE5 264 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 ITLN1Q8WWA0 313 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 STARD8Q92502 1023 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 RAD51AP1Q96B01 352 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 MED8Q96G25 268 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 WBP1Q96G27 269 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 SAMD8Q96LT4 415 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 OR5M11Q96RB7 305 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 RANBP9Q96S59 729 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 NAPGQ99747 312 aaPredicted RBP3.33□□□□□ -1.88
HTT-210ENST00000512909 PYGO2Q9BRQ0 406 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 TRIM4Q9C037 500 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 IL22Q9GZX6 179 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 OR52A5Q9H2C5 316 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 KIR3DX1Q9H7L2 352 aa3.33□□□□□ -1.88
HTT-210ENST00000512909 ROPN1Q9HAT0 212 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms