RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 PRDM13Q9H4Q3 707 aa9.78□□□□□ -0.84
RNF4-216ENST00000511859 ZNF224Q9NZL3 707 aa9.78□□□□□ -0.84
RNF4-216ENST00000511859 SEC14L4Q9UDX3 406 aa9.78□□□□□ -0.84
RNF4-216ENST00000511859 E9PBE3 544 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 HOXA3O43365 443 aaPredicted RBP9.77□□□□□ -0.84
RNF4-216ENST00000511859 OR2T1O43869 369 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 ALDOCP09972 364 aaKnown RBP9.77□□□□□ -0.84
RNF4-216ENST00000511859 LBPP18428 481 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 RPS4Y1P22090 263 aaKnown RBP9.77□□□□□ -0.84
RNF4-216ENST00000511859 SLC6A9P48067 706 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 CLDN8P56748 225 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 PAX8Q06710 450 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 RBBP4Q09028 425 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 MFSD13AQ14CX5 517 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 TSTQ16762 297 aaKnown RBP9.77□□□□□ -0.84
RNF4-216ENST00000511859 PHYHD1Q5SRE7 291 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 OR4F3Q6IEY1 312 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 PIWIL3Q7Z3Z3 882 aaKnown RBP9.77□□□□□ -0.84
RNF4-216ENST00000511859 REC114Q7Z4M0 266 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 RNF130Q86XS8 419 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 ZNF584Q8IVC4 421 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 PARP8Q8N3A8 854 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 VPS37AQ8NEZ2 397 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 OR8J2Q8NGG1 315 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 OR4A15Q8NGL6 344 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 NEURL3Q96EH8 262 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 DIRC2Q96SL1 478 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 FOXB1Q99853 325 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 ELAC2Q9BQ52 826 aaKnown RBP9.77□□□□□ -0.84
RNF4-216ENST00000511859 TMEM120AQ9BXJ8 343 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 BCL2L14Q9BZR8 327 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 EGLN1Q9GZT9 426 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 TCF7L2Q9NQB0 619 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 C1RLQ9NZP8 487 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 GPR45Q9Y5Y3 372 aa9.77□□□□□ -0.84
RNF4-216ENST00000511859 TANC2Q9HCD6 1990 aa9.77□□□□□ -0.85
RNF4-216ENST00000511859 PRSS51A0A1B0GVH4 220 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 CDHR4A6H8M9 788 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 GMNCA6NCL1 334 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 SRRM5B3KS81 715 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 HMGN4O00479 90 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 AIM2O14862 343 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 FZD7O75084 574 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 ENTPD5O75356 428 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 UBOX5O94941 541 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 TGDSO95455 350 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 IGHV3-13P01766 116 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 LCKP06239 509 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 GKN3PP0CG01 181 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 FAM157BP0CG42 384 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 G6PDP11413 515 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 B4GALT1P15291 398 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 DRD4P21917 467 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 RPS5P46782 204 aaKnown RBP9.76□□□□□ -0.85
RNF4-216ENST00000511859 ANXA11P50995 505 aaKnown RBP9.76□□□□□ -0.85
RNF4-216ENST00000511859 ZNF81P51508 661 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 UCP2P55851 309 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 RPL15P61313 204 aaKnown RBP9.76□□□□□ -0.85
RNF4-216ENST00000511859 TXNL4AP83876 142 aaKnown RBP9.76□□□□□ -0.85
RNF4-216ENST00000511859 EMX2Q04743 252 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 MAD2L1Q13257 205 aaPredicted RBP9.76□□□□□ -0.85
RNF4-216ENST00000511859 SYPL1Q16563 259 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 Q6ZPA2 131 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 H1FNTQ75WM6 255 aaPredicted RBP9.76□□□□□ -0.85
RNF4-216ENST00000511859 ZNF771Q7L3S4 317 aaPredicted RBP9.76□□□□□ -0.85
RNF4-216ENST00000511859 NET1Q7Z628 596 aaPredicted RBP9.76□□□□□ -0.85
RNF4-216ENST00000511859 CPLX4Q7Z7G2 160 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 PEX5LQ8IYB4 626 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 KLHL36Q8N4N3 616 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 SPICQ8N5J4 248 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 ZDHHC16Q969W1 377 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 MAELQ96JY0 434 aaKnown RBP9.76□□□□□ -0.85
RNF4-216ENST00000511859 PTDSS2Q9BVG9 487 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 C1orf198Q9H425 327 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 PATZ1Q9HBE1 687 aaKnown RBP9.76□□□□□ -0.85
RNF4-216ENST00000511859 RLIMQ9NVW2 624 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 IL20RAQ9UHF4 553 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 RNF114Q9Y508 228 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 NPTNQ9Y639 398 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 TENM3Q9P273 2699 aa9.76□□□□□ -0.85
RNF4-216ENST00000511859 A8MXK9 166 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 C3orf80F5H4A9 247 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 UBDO15205 165 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 CLPXO76031 633 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 CPSF4O95639 269 aaKnown RBP9.75□□□□□ -0.85
RNF4-216ENST00000511859 SNAP29O95721 258 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 PLATP00750 562 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 PTHP01270 115 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 SBK2P0C263 348 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 OR8G3PP0DMU2 310 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 IGHV4-38-2P0DP08 117 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 NCF2P19878 526 aaPredicted RBP9.75□□□□□ -0.85
RNF4-216ENST00000511859 MAKP20794 623 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 CHI3L1P36222 383 aaPredicted RBP9.75□□□□□ -0.85
RNF4-216ENST00000511859 KRTAP10-3P60369 221 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 RELBQ01201 579 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 EGR4Q05215 589 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 BEAN1Q3B7T3 259 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 ANXA8L1Q5VT79 327 aa9.75□□□□□ -0.85
RNF4-216ENST00000511859 CARD17Q5XLA6 110 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms