RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 MRPL47Q9HD33 250 aaKnown RBP2.05□□□□□ -2.08
CHD1-207ENST00000511628 ZNF331Q9NQX6 463 aaPredicted RBP2.05□□□□□ -2.08
CHD1-207ENST00000511628 GLRX2Q9NS18 164 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 EXD2Q9NVH0 621 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 DEC1Q9P2X7 70 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 NUP50Q9UKX7 468 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 VANGL2Q9ULK5 521 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 HEBP2Q9Y5Z4 205 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 CACNG2Q9Y698 323 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 CEMIPQ8WUJ3 1361 aa2.05□□□□□ -2.08
CHD1-207ENST00000511628 A6NDX4 124 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 SPECC1L-ADORA2AF8WAN1 911 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 RAB29O14966 203 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 CLOCKO15516 846 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 SOX15O60248 233 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 SUPT3HO75486 399 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 EIF3GO75821 320 aaKnown RBP eCLIP2.04□□□□□ -2.08
CHD1-207ENST00000511628 OR2J3O76001 311 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 CLPXO76031 633 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 UTS2O95399 124 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 CLIC3O95833 236 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 TPM2P07951 284 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 ZNF30P17039 623 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 MDKP21741 143 aaPredicted RBP2.04□□□□□ -2.08
CHD1-207ENST00000511628 CCNCP24863 283 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 AQP2P41181 271 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 TMED10P49755 219 aaKnown RBP2.04□□□□□ -2.08
CHD1-207ENST00000511628 CCR6P51684 374 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 PAX5Q02548 391 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 PPP1R7Q15435 360 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 CARD17Q5XLA6 110 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 SPECC1LQ69YQ0 1117 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 EID2Q8N6I1 236 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 Q8N9L7 120 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 Q8N9W7 124 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 OR7G2Q8NG99 324 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 OR1N2Q8NGR9 330 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 OR2G3Q8NGZ4 309 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 OR5B3Q8NH48 314 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 DTX3LQ8TDB6 740 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 GPR151Q8TDV0 419 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 IL22RA2Q969J5 263 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 DNAJC19Q96DA6 116 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 GABARAPL3Q9BY60 117 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 ILKAPQ9H0C8 392 aaPredicted RBP2.04□□□□□ -2.08
CHD1-207ENST00000511628 VPS37BQ9H9H4 285 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 PTTG3PQ9NZH4 202 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 GNPTGQ9UJJ9 305 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 PITPNC1Q9UKF7 332 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 N6AMT1Q9Y5N5 214 aa2.04□□□□□ -2.08
CHD1-207ENST00000511628 PDS5BQ9NTI5 1447 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 NINLQ9Y2I6 1382 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 MAP3K15Q6ZN16 1313 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 A0A1B0GUA9 196 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 PLAC8L1A1L4L8 177 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 SMCO2A6NFE2 343 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 FAM166BA8MTA8 275 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 HIDE1A8MVS5 230 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 TCP11X1B4DZS4 312 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 PEX7O00628 323 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 LSM1O15116 133 aaKnown RBP2.03□□□□□ -2.08
CHD1-207ENST00000511628 MRPS12O15235 138 aaKnown RBP2.03□□□□□ -2.08
CHD1-207ENST00000511628 SLC31A2O15432 143 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 CD5LO43866 347 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 CA11O75493 328 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 FTH1P02794 183 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 PCCAP05165 728 aaPredicted RBP2.03□□□□□ -2.08
CHD1-207ENST00000511628 TROVE2P10155 538 aaKnown RBP eCLIP2.03□□□□□ -2.08
CHD1-207ENST00000511628 CCR8P51685 355 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 KRTAP10-1P60331 282 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 YWHAGP61981 247 aaKnown RBP eCLIP2.03□□□□□ -2.08
CHD1-207ENST00000511628 RPS15P62841 145 aaKnown RBP2.03□□□□□ -2.08
CHD1-207ENST00000511628 SELENBP1Q13228 472 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 RCN1Q15293 331 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 KCTD19Q17RG1 926 aaPredicted RBP2.03□□□□□ -2.08
CHD1-207ENST00000511628 RFX4Q33E94 735 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 RAET1LQ5VY80 246 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 ANKRD26P1Q6NSI1 321 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 TMEM220Q6QAJ8 160 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 ZNF429Q86V71 674 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 STPG2Q8N412 459 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 ARIH2OSQ8N7S6 290 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 ZFP41Q8N8Y5 198 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 CCDC148Q8NFR7 591 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 OR10G9Q8NGN4 311 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 STARD4Q96DR4 205 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 CCDC126Q96EE4 140 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 AURKBQ96GD4 344 aaPredicted RBP2.03□□□□□ -2.08
CHD1-207ENST00000511628 KCTD14Q9BQ13 255 aaPredicted RBP2.03□□□□□ -2.08
CHD1-207ENST00000511628 HDHD3Q9BSH5 251 aaPredicted RBP2.03□□□□□ -2.08
CHD1-207ENST00000511628 CDC42EP4Q9H3Q1 356 aaKnown RBP2.03□□□□□ -2.08
CHD1-207ENST00000511628 RPF2Q9H7B2 306 aaKnown RBP2.03□□□□□ -2.08
CHD1-207ENST00000511628 TMEM185BQ9H7F4 350 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 NEK6Q9HC98 313 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 ZNF160Q9HCG1 818 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 DMAP1Q9NPF5 467 aaPredicted RBP2.03□□□□□ -2.08
CHD1-207ENST00000511628 CTPS2Q9NRF8 586 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 RAB20Q9NX57 234 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 KLK12Q9UKR0 248 aa2.03□□□□□ -2.08
CHD1-207ENST00000511628 ING4Q9UNL4 249 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms