RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 ZNF540Q8NDQ6 660 aa2.75□□□□□ -1.97
TOPBP1-208ENST00000511439 OR2L2Q8NH16 312 aa2.75□□□□□ -1.97
TOPBP1-208ENST00000511439 ZPLD1Q8TCW7 415 aa2.75□□□□□ -1.97
TOPBP1-208ENST00000511439 ZNF606Q8WXB4 792 aa2.75□□□□□ -1.97
TOPBP1-208ENST00000511439 RAB39BQ96DA2 213 aa2.75□□□□□ -1.97
TOPBP1-208ENST00000511439 WFIKKN1Q96NZ8 548 aa2.75□□□□□ -1.97
TOPBP1-208ENST00000511439 CITED1Q99966 193 aa2.75□□□□□ -1.97
TOPBP1-208ENST00000511439 B9D2Q9BPU9 175 aa2.75□□□□□ -1.97
TOPBP1-208ENST00000511439 FUNDC2Q9BWH2 189 aa2.75□□□□□ -1.97
TOPBP1-208ENST00000511439 DDX47Q9H0S4 455 aaKnown RBP2.75□□□□□ -1.97
TOPBP1-208ENST00000511439 CDC42EP4Q9H3Q1 356 aaKnown RBP2.75□□□□□ -1.97
TOPBP1-208ENST00000511439 NT5DC2Q9H857 520 aa2.75□□□□□ -1.97
TOPBP1-208ENST00000511439 CYP3A43Q9HB55 503 aa2.75□□□□□ -1.97
TOPBP1-208ENST00000511439 HOMER3Q9NSC5 361 aa2.75□□□□□ -1.97
TOPBP1-208ENST00000511439 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.75□□□□□ -1.97
TOPBP1-208ENST00000511439 EXTL2Q9UBQ6 330 aa2.75□□□□□ -1.97
TOPBP1-208ENST00000511439 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.75□□□□□ -1.97
TOPBP1-208ENST00000511439 DIMT1Q9UNQ2 313 aaKnown RBP2.75□□□□□ -1.97
TOPBP1-208ENST00000511439 RABL2BQ9UNT1 228 aa2.75□□□□□ -1.97
TOPBP1-208ENST00000511439 RRP15Q9Y3B9 282 aaKnown RBP2.75□□□□□ -1.97
TOPBP1-208ENST00000511439 PCYT1BQ9Y5K3 369 aaPredicted RBP2.75□□□□□ -1.97
TOPBP1-208ENST00000511439 MALRD1Q5VYJ5 2156 aa2.75□□□□□ -1.97
TOPBP1-208ENST00000511439 IGHV3-16A0A0C4DH30 117 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 A0A1B0GUS0 222 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 MACROD2A1Z1Q3 448 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 OR6C74A6NCV1 312 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 RPL37AP8A6NKH3 93 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 FAM166BA8MTA8 275 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 A8MX80 341 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 SRRM5B3KS81 715 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 H3BMH7 237 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 K7EPI3 171 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 PSMD11O00231 422 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 PES1O00541 588 aaKnown RBP2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 MAPK13O15264 365 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 TSPAN2O60636 221 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 GALR3O60755 368 aaPredicted RBP2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 ATP6V1G1O75348 118 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 SOD1P00441 154 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 IGLV3-25P01717 112 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 IGHG3P01860 377 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 SLC35E2P0CK97 266 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 FOLR2P14207 255 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 MDKP21741 143 aaPredicted RBP2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 PTPN6P29350 595 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 ACAA2P42765 397 aaKnown RBP2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 GEMP55040 296 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 DIO3P55073 304 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 PPIAP62937 165 aaKnown RBP2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 CDKL1Q00532 357 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 PLGLB1Q02325 96 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 CYP24A1Q07973 514 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 EXOSC7Q15024 291 aaKnown RBP2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 ZNHIT3Q15649 155 aaPredicted RBP2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 TAF9Q16594 264 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 ZNF239Q16600 458 aaKnown RBP2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 DEFB110Q30KQ9 67 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 CCDC40Q4G0X9 1142 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 ACSF3Q4G176 576 aaPredicted RBP2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 PRAMEF7Q5VXH5 474 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 HIST2H2AA3Q6FI13 130 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 H3F3CQ6NXT2 135 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 WASH2PQ6VEQ5 465 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 Q6ZRG5 221 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 RBM43Q6ZSC3 357 aaKnown RBP2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 SLC22A16Q86VW1 577 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 SLC26A11Q86WA9 606 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 PRSS58Q8IYP2 241 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 BPIFB2Q8N4F0 458 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 ZNF525Q8N782 197 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 OR1K1Q8NGR3 316 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 M1APQ8TC57 530 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 C10orf105Q8TEF2 133 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 COX14Q96I36 57 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 CAPZA3Q96KX2 299 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 NSMCE2Q96MF7 247 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 SFXN3Q9BWM7 321 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 CARD9Q9H257 536 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 EXO5Q9H790 373 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 ZDHHC11Q9H8X9 412 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 SP140LQ9H930 580 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 NTN4Q9HB63 628 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 ESM1Q9NQ30 184 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 DDIT4Q9NX09 232 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 DCAF16Q9NXF7 216 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 ZNF282Q9UDV7 671 aaPredicted RBP2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 FETUBQ9UGM5 382 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 AURKCQ9UQB9 309 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 STRAPQ9Y3F4 350 aaKnown RBP2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 HECTD4Q9Y4D8 3996 aa2.74□□□□□ -1.97
TOPBP1-208ENST00000511439 EML6Q6ZMW3 1958 aa2.73□□□□□ -1.97
TOPBP1-208ENST00000511439 C5orf63A6NC05 138 aa2.73□□□□□ -1.97
TOPBP1-208ENST00000511439 GOLGA6L4A6NEF3 574 aa2.73□□□□□ -1.97
TOPBP1-208ENST00000511439 GPR89AB7ZAQ6 455 aa2.73□□□□□ -1.97
TOPBP1-208ENST00000511439 EEF2KO00418 725 aaKnown RBP2.73□□□□□ -1.97
TOPBP1-208ENST00000511439 PEX11AO75192 247 aa2.73□□□□□ -1.97
TOPBP1-208ENST00000511439 EPPINO95925 133 aa2.73□□□□□ -1.97
TOPBP1-208ENST00000511439 FCER2P06734 321 aa2.73□□□□□ -1.97
TOPBP1-208ENST00000511439 HCKP08631 526 aa2.73□□□□□ -1.97
TOPBP1-208ENST00000511439 CCDC159P0C7I6 412 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms