RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 TCRBV16S1A1N1A0A5B0 115 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 LMO7DNF2Z398 122 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 TSPAN2O60636 221 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 GPANK1O95872 356 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 RPS15P62841 145 aaKnown RBP16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 CBFBQ13951 182 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 NSDHLQ15738 373 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 SLC25A25Q6KCM7 469 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 C9orf40Q8IXQ3 194 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 SIX5Q8N196 739 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 PRSS35Q8N3Z0 413 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 FAM109AQ8N4B1 249 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 OR2T35Q8NGX2 323 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 CEP76Q8TAP6 659 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 TSEN15Q8WW01 171 aaKnown RBP16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 ASB17Q8WXJ9 295 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 RADILQ96JH8 1075 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 C4orf45Q96LM5 186 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 METTL17Q9H7H0 456 aaPredicted RBP16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 KCNG2Q9UJ96 466 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 SLC22A5O76082 557 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 GLSO94925 669 aaPredicted RBP16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 OR6A2O95222 327 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 PTHLHP12272 177 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 FBLP22087 321 aaKnown RBP16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 ZNF81P51508 661 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 SGCBQ16585 318 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 C1QL3Q5VWW1 255 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 OGFOD3Q6PK18 319 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 SLC29A4Q7RTT9 530 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 OR10AC1Q8NH08 325 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 OR8K3Q8NH51 312 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 ULBP3Q9BZM4 244 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 FBXL3Q9UKT7 428 aa16.22■□□□□ 0.19
CCHCR1-228ENST00000509552 H3BMH7 237 aa16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 TO15178 435 aa16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 XRCC3O43542 346 aa16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 DCTDP32321 178 aa16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 FAUP35544 74 aaKnown RBP16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 BLVRAP53004 296 aa16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 RPL27P61353 136 aaKnown RBP16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 LGALSLQ3ZCW2 172 aaPredicted RBP16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 GLDNQ6ZMI3 551 aaPredicted RBP16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 LRRC69Q6ZNQ3 347 aa16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 Q6ZTK2 550 aa16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 NLRC3Q7RTR2 1065 aa16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 OR8H3Q8N146 312 aa16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 OR51A4Q8NGJ6 313 aa16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 SORCS2Q96PQ0 1159 aa16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 OR8B4Q96RC9 309 aa16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 WWTR1Q9GZV5 400 aa16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 LMAN1LQ9HAT1 526 aa16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 ELOVL3Q9HB03 270 aa16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 GPN1Q9HCN4 374 aaPredicted RBP16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 ZNF304Q9HCX3 659 aa16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 ING1Q9UK53 422 aaPredicted RBP16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 B9D1Q9UPM9 204 aa16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 TP53BP1Q12888 1972 aaPredicted RBP16.21■□□□□ 0.19
CCHCR1-228ENST00000509552 PRSS37A4D1T9 235 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 H3BSH0 61 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 SDC3O75056 442 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 RBBP9O75884 186 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 PLGP00747 810 aaPredicted RBP16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 SELENOPP49908 381 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 POLR2HP52434 150 aaKnown RBP16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 ACKR1Q16570 336 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 CLPPQ16740 277 aaPredicted RBP16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 MEP1BQ16820 701 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 LINC00303Q3SY05 128 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 ESCO2Q56NI9 601 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 WDR38Q5JTN6 314 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 FDX2Q6P4F2 183 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 GLB1L2Q8IW92 636 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 MEIOBQ8N635 442 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 MCHR2Q969V1 340 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 OMA1Q96E52 524 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 MED30Q96HR3 178 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 AMELYQ99218 206 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 NUP210LQ5VU65 1888 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 ARPC4-TTLL3A0A0A6YYG9 625 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 SUSD5O60279 629 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 TMIGD3P0DMS9 266 aaPredicted RBP16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 RAD52P43351 418 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 KIR3DL2P43630 455 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 PNLIPRP2P54317 469 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 P2RX3P56373 397 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 SLC17A1Q14916 467 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 VWA2Q5GFL6 755 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 SLC18B1Q6NT16 456 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 CHRDL2Q6WN34 429 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 KANSL1Q7Z3B3 1105 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 PRSS58Q8IYP2 241 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 OR1L3Q8NH93 324 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 HEXA-AS1Q9H8Q6 139 aa16.2■□□□□ 0.18
CCHCR1-228ENST00000509552 TMED7-TICAM2A0A0A6YYA0 188 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 A0A1W2PQ72 361 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 ICMTO60725 284 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 CPN1P15169 458 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 CCKBRP32239 447 aa16.19■□□□□ 0.18
CCHCR1-228ENST00000509552 OR1D5P58170 312 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms