RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 PRKCDQ05655 676 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 BSPH1Q075Z2 132 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 PMS2P3Q13401 168 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 CAMK2DQ13557 499 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 DGCR6Q14129 220 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 TRAM2Q15035 370 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 P2RY6Q15077 328 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 ACKR1Q16570 336 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 HIST3H3Q16695 136 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 CEACAM16Q2WEN9 425 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 MESTQ5EB52 335 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 TMEM255AQ5JRV8 349 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 OTPQ5XKR4 325 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 GTF2IRD2BQ6EKJ0 949 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 ADAM5Q6NVV9 412 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 KLHL24Q6TFL4 600 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 ZNF704Q6ZNC4 412 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 SLC35D2Q76EJ3 337 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 FAM122BQ7Z309 247 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 NANOGNBQ7Z5D8 188 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 ZER1Q7Z7L7 766 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 TMEM179BQ7Z7N9 219 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 GTF2IRD2Q86UP8 949 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 UEVLDQ8IX04 471 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 ZNF100Q8IYN0 542 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 STEAP2Q8NFT2 490 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 OR9Q2Q8NGE9 314 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 OR8D4Q8NGM9 314 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 ACOT11Q8WXI4 607 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 NABP1Q96AH0 204 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 BPIFA2Q96DR5 249 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 PYURFQ96I23 114 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 NSMCE2Q96MF7 247 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 ZNF347Q96SE7 839 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 EPYCQ99645 322 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 PIP5K1AQ99755 562 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 BTBD10Q9BSF8 475 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 MRPL13Q9BYD1 178 aaKnown RBP6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 ASB6Q9NWX5 421 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 ACTR3BQ9P1U1 418 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 CGGBP1Q9UFW8 167 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 ST6GALNAC2Q9UJ37 374 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 PRPF19Q9UMS4 504 aaKnown RBP6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 ADAM18Q9Y3Q7 739 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 LYVE1Q9Y5Y7 322 aa6.28□□□□□ -1.4
TOPBP1-207ENST00000509162 ARPC4-TTLL3A0A0A6YYG9 625 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 M0R3G1 203 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 PTP4A3O75365 173 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 TRMUO75648 421 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 IFNA14P01570 189 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 IGLV1-44P01699 117 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 H1F0P07305 194 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 SOD3P08294 240 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 PATE4P0C8F1 98 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 ADORA3P0DMS8 318 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 B4GALT1P15291 398 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 NQO1P15559 274 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 ZNF43P17038 809 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 ANOS1P23352 680 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 GTF2E2P29084 291 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 RRM2P31350 389 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 ZNF83P51522 516 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 ARF1P84077 181 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 MXRA7P84157 204 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 MYBPC1Q00872 1141 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 ST3GAL3Q11203 375 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 TOP3AQ13472 1001 aaPredicted RBP6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 PPA1Q15181 289 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 PGGHGQ32M88 737 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 BEX5Q5H9J7 111 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 FGD3Q5JSP0 725 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 TIMM23BQ5SRD1 257 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 SLC35F1Q5T1Q4 408 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 TMEM225Q6GV28 225 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 PGBD2Q6P3X8 592 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 Q6ZS46 218 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 ZNF627Q7L945 461 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 PXKQ7Z7A4 578 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 STK32CQ86UX6 486 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 ZNF584Q8IVC4 421 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 HS3ST5Q8IZT8 346 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 UBE2J2Q8N2K1 259 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 C10orf53Q8N6V4 93 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 C1orf162Q8NEQ5 155 aaPredicted RBP6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 OR4K5Q8NGD3 323 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 RASD2Q96D21 266 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 ASB9Q96DX5 294 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 MEGF10Q96KG7 1140 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 TNFRSF13CQ96RJ3 184 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 C1QTNF6Q9BXI9 259 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 ASPNQ9BXN1 380 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 PLA2G12AQ9BZM1 189 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 C1orf21Q9H246 121 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 CXXC4Q9H2H0 198 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 ANKRD19PQ9H560 264 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 UBTD1Q9HAC8 227 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 CRLF2Q9HC73 371 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 IL1RAPQ9NPH3 570 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 NANSQ9NR45 359 aa6.27□□□□□ -1.41
TOPBP1-207ENST00000509162 CRNNQ9UBG3 495 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms