RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 MTPNP58546 118 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 CDK6Q00534 326 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 LGALS3BPQ08380 585 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 EPS8Q12929 822 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 SELENBP1Q13228 472 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 CEACAM7Q14002 265 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 GNA13Q14344 377 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 LARS2Q15031 903 aaKnown RBP3.99□□□□□ -1.77
NUP54-206ENST00000508465 SYT14P1Q58G82 188 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 RNASE12Q5GAN4 147 aaKnown RBP3.99□□□□□ -1.77
NUP54-206ENST00000508465 LRIF1Q5T3J3 769 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 GCNT6Q5T4J0 391 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 REEP3Q6NUK4 255 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 TMPPEQ6ZT21 453 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 MSANTD1Q6ZTZ1 278 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 GRINAQ7Z429 371 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 BCDIN3DQ7Z5W3 292 aaKnown RBP3.99□□□□□ -1.77
NUP54-206ENST00000508465 PTOV1Q86YD1 416 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 RBM45Q8IUH3 476 aaKnown RBP3.99□□□□□ -1.77
NUP54-206ENST00000508465 ZNF100Q8IYN0 542 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 UBE2J2Q8N2K1 259 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 KDM8Q8N371 416 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 TMEM99Q8N816 258 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 SMYD1Q8NB12 490 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 OR6K3Q8NGY3 331 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 RNF128Q8TEB7 428 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 SLC25A36Q96CQ1 311 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 DACH2Q96NX9 599 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 CGREF1Q99674 301 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 C1QTNF6Q9BXI9 259 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 SLCO5A1Q9H2Y9 848 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 RABEP2Q9H5N1 569 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 PLEKHF2Q9H8W4 249 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 EXOSC3Q9NQT5 275 aaKnown RBP3.99□□□□□ -1.77
NUP54-206ENST00000508465 SAR1AQ9NR31 198 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 PAQR5Q9NXK6 330 aaPredicted RBP3.99□□□□□ -1.77
NUP54-206ENST00000508465 CALML5Q9NZT1 146 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 ARMCX1Q9P291 453 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 CHRNA9Q9UGM1 479 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 USP22Q9UPT9 525 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 GPR52Q9Y2T5 361 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 NDUFAF1Q9Y375 327 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 NIPBLQ6KC79 2804 aaeCLIP3.99□□□□□ -1.77
NUP54-206ENST00000508465 MYO9AB2RTY4 2548 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 PRRC2AP48634 2157 aaKnown RBP3.99□□□□□ -1.77
NUP54-206ENST00000508465 PRR14LQ5THK1 2151 aa3.99□□□□□ -1.77
NUP54-206ENST00000508465 A0A1W2PR80 420 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 ENO4A6NNW6 628 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 DEFB108AA8MXU0 73 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 M0QX08 132 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 ANGPT2O15123 496 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 TPST2O60704 377 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 LYZL6O75951 148 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 TOMM40O96008 361 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 PABPC4LP0CB38 370 aaKnown RBP3.98□□□□□ -1.77
NUP54-206ENST00000508465 TROVE2P10155 538 aaKnown RBP eCLIP3.98□□□□□ -1.77
NUP54-206ENST00000508465 GPX2P18283 190 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 CDH2P19022 906 aaPredicted RBP3.98□□□□□ -1.77
NUP54-206ENST00000508465 PPIBP23284 216 aaKnown RBP3.98□□□□□ -1.77
NUP54-206ENST00000508465 DNASE1P24855 282 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 HTR2AP28223 471 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 MDH1P40925 334 aaKnown RBP3.98□□□□□ -1.77
NUP54-206ENST00000508465 MAGEA8P43361 318 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 ART1P52961 327 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 COPZ1P61923 177 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 CSNK2A1P68400 391 aaPredicted RBP3.98□□□□□ -1.77
NUP54-206ENST00000508465 SLC35A1P78382 337 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 TXNL4AP83876 142 aaKnown RBP3.98□□□□□ -1.77
NUP54-206ENST00000508465 SORDQ00796 357 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 DMTNQ08495 405 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 SCARB2Q14108 478 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 DAG1Q14118 895 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 RNPS1Q15287 305 aaKnown RBP3.98□□□□□ -1.77
NUP54-206ENST00000508465 OR7A5Q15622 319 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 STK11Q15831 433 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 DUSP7Q16829 419 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 CYP51A1Q16850 503 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 LIN52Q52LA3 116 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 HSP90B2PQ58FF3 399 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 C9orf135Q5VTT2 229 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 METTL21CQ5VZV1 264 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 WBP2NLQ6ICG8 309 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 NANOGP8Q6NSW7 305 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 C3orf33Q6P1S2 294 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 TFAP2EQ6VUC0 442 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 BHLHA15Q7RTS1 189 aaPredicted RBP3.98□□□□□ -1.77
NUP54-206ENST00000508465 GALNT5Q7Z7M9 940 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 DHDDSQ86SQ9 333 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 SNX32Q86XE0 403 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 ARMC8Q8IUR7 673 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 ZNF440Q8IYI8 595 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 GABRG1Q8N1C3 465 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 SLC43A2Q8N370 569 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 ZIC4Q8N9L1 334 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 OR52E4Q8NGH9 312 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 OR10A6Q8NH74 314 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 BBS10Q8TAM1 723 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 MPLKIPQ8TAP9 179 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 NEUROG1Q92886 237 aa3.98□□□□□ -1.77
NUP54-206ENST00000508465 TAAR8Q969N4 342 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms