RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 ASMTP46597 345 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 RPS9P46781 194 aaKnown RBP2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 CXCL12P48061 93 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 NUDT2P50583 147 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 TPMTP51580 245 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 CCR8P51685 355 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 POLR2JP52435 117 aaKnown RBP2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 ERVPABLB-1P60509 514 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 PFN3P60673 137 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 SRP54P61011 504 aaKnown RBP2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 ACTR3P61158 418 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 NCALDP61601 193 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 RPS27AP62979 156 aaKnown RBP2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 SKP1P63208 163 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 KCNJ2P63252 427 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 ELF3P78545 371 aaPredicted RBP2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 RELAQ04206 551 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC34A1Q06495 639 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 PRDX1Q06830 199 aaKnown RBP2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 RBBP4Q09028 425 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 BNIP2Q12982 314 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 CHIT1Q13231 466 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 RCAN2Q14206 197 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 LASP1Q14847 261 aaKnown RBP2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 HEPACAMQ14CZ8 416 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 ABRAXAS2Q15018 415 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 IRF4Q15306 451 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 ELOCQ15369 112 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 OR1C1Q15619 314 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 PCK2Q16822 640 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 AGKQ53H12 422 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 PYCR3Q53H96 274 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 CT45A2Q5DJT8 189 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 XKR7Q5GH72 579 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 SAMD4BQ5PRF9 694 aaKnown RBP2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 MUC21Q5SSG8 566 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 ANXA8L1Q5VT79 327 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 C1orf146Q5VVC0 180 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 IL23RQ5VWK5 629 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 CLEC6AQ6EIG7 209 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 NIPAL1Q6NVV3 410 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 ZFP1Q6P2D0 407 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 ABRAXAS1Q6UWZ7 409 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 TMIGD1Q6UXZ0 262 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 ZNF730Q6ZMV8 503 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 Q6ZSR6 202 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 RFLNAQ6ZTI6 216 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 RFPL4BQ6ZWI9 263 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 PAGE2Q7Z2X7 111 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 PRSS42Q7Z5A4 293 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 SYVN1Q86TM6 617 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 C17orf64Q86WR6 236 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 SNX32Q86XE0 403 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 TMEM126BQ8IUX1 230 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 ZNF547Q8IVP9 402 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 DEFB107AQ8IZN7 70 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 PGAM4Q8N0Y7 254 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC34A3Q8N130 599 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 SFRP1Q8N474 314 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 TRIML2Q8N7C3 387 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 CLEC1AQ8NC01 280 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 CATSPER1Q8NEC5 780 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 TRPV3Q8NET8 790 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 OR2L8Q8NGY9 312 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 OR4Q3Q8NH05 313 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC5A11Q8WWX8 675 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 LCN9Q8WX39 176 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 FAM46BQ96A09 425 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 LRRC58Q96CX6 371 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 WDR34Q96EX3 536 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 ITCHQ96J02 903 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 PPP1R36Q96LQ0 422 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 ALKBH3Q96Q83 286 aaPredicted RBP2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 OR2M4Q96R27 311 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 OR52B2Q96RD2 323 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 AIF1LQ9BQI0 150 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 THTPAQ9BU02 230 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 GSDMCQ9BYG8 508 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 NLNQ9BYT8 704 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 SHCBP1LQ9BZQ2 653 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 DPY30Q9C005 99 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 STRADBQ9C0K7 418 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 ROGDIQ9GZN7 287 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 ATG10Q9H0Y0 220 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 OR52A5Q9H2C5 316 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 CXXC4Q9H2H0 198 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 ADNPQ9H2P0 1102 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 VCXQ9H320 206 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 LIME1Q9H400 295 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 ZNF385DQ9H6B1 395 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 YY1AP1Q9H869 796 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 WDR41Q9HAD4 459 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 PLEKHA3Q9HB20 300 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 LRTM1Q9HBL6 345 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC40A1Q9NP59 571 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 C8orf4Q9NR00 106 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 DEPPQ9NTK1 212 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 IMP3Q9NV31 184 aaKnown RBP2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 AIG1Q9NVV5 245 aa2.02□□□□□ -2.09
TOPBP1-205ENST00000506779 TECRQ9NZ01 308 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms