RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 TMCC3Q9ULS5 477 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 IGSF9BQ9UPX0 1349 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 MSH6P52701 1360 aa1.58□□□□□ -2.16
GYPB-207ENST00000506679 DOCK8Q8NF50 2099 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 TRAV39A0A0B4J263 110 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 A0A0B4J2A0 478 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 A0A1B0GVL5 298 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 OR52A4PA6NMU1 304 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 ZNF705GA8MUZ8 300 aaPredicted RBP1.57□□□□□ -2.16
GYPB-207ENST00000506679 INS-IGF2F8WCM5 200 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 GOLGA8SH3BPF8 625 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 CXCL11O14625 94 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 BET1O15155 118 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 CTDNEP1O95476 244 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 IL1BP01584 269 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 ATP1B2P14415 290 aaPredicted RBP1.57□□□□□ -2.16
GYPB-207ENST00000506679 ETS2P15036 469 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 RORAP35398 523 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 HSD17B2P37059 387 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 RFX3P48380 749 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 UGT2B15P54855 530 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 ZNF92Q03936 586 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 GK3PQ14409 553 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 LY6EQ16553 131 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 LRRC23Q53EV4 343 aaPredicted RBP1.57□□□□□ -2.16
GYPB-207ENST00000506679 C6orf226Q5I0X4 101 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 STRADAQ7RTN6 431 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 PEX26Q7Z412 305 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 TMEM135Q86UB9 458 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 ZCCHC7Q8N3Z6 543 aaKnown RBP1.57□□□□□ -2.16
GYPB-207ENST00000506679 SDR42E1Q8WUS8 393 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 GEMIN6Q8WXD5 167 aaKnown RBP1.57□□□□□ -2.16
GYPB-207ENST00000506679 TMEM54Q969K7 222 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 MED8Q96G25 268 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 HSFY1Q96LI6 401 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 FMO2Q99518 471 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 FN3KRPQ9HA64 309 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 SGK2Q9HBY8 427 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 NT5MQ9NPB1 228 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 ZNF629Q9UEG4 869 aaPredicted RBP1.57□□□□□ -2.16
GYPB-207ENST00000506679 SHPKQ9UHJ6 478 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 CLEC4AQ9UMR7 237 aa1.57□□□□□ -2.16
GYPB-207ENST00000506679 PCP4L1A6NKN8 68 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 GPR89AB7ZAQ6 455 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 ENTPD5O75356 428 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 FOXH1O75593 365 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 SURF6O75683 361 aaKnown RBP1.56□□□□□ -2.16
GYPB-207ENST00000506679 EIF3GO75821 320 aaKnown RBP eCLIP1.56□□□□□ -2.16
GYPB-207ENST00000506679 TMEM50AO95807 157 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 GPR89BP0CG08 455 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 FOLR1P15328 257 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 MUC1P15941 1255 aaPredicted RBP1.56□□□□□ -2.16
GYPB-207ENST00000506679 PSMC3P17980 439 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 ATP5C1P36542 298 aaKnown RBP1.56□□□□□ -2.16
GYPB-207ENST00000506679 EPS15P42566 896 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 SSR1P43307 286 aaKnown RBP1.56□□□□□ -2.16
GYPB-207ENST00000506679 ACTR1AP61163 376 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 ACTA2P62736 377 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 ACTC1P68032 377 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 ANKDD1AQ495B1 522 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 PMF1Q6P1K2 205 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 IGFL1Q6UW32 110 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 KDM7AQ6ZMT4 941 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 ZNF493Q6ZR52 646 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 LYPD1Q8N2G4 141 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 MREGQ8N565 214 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 BHLHE23Q8NDY6 225 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 OR8J1Q8NGP2 316 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 LKAAEAR1Q8TD35 194 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 CTRCQ99895 268 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 RARRES2Q99969 163 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 SLC39A3Q9BRY0 314 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 NDFIP1Q9BT67 221 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 TMEM59Q9BXS4 323 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 NT5C3AQ9H0P0 336 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 EXTL2Q9UBQ6 330 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 PSG8Q9UQ74 426 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 WIF1Q9Y5W5 379 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 GAKO14976 1311 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 CENPJQ9HC77 1338 aaPredicted RBP1.56□□□□□ -2.16
GYPB-207ENST00000506679 COL1A2P08123 1366 aa1.56□□□□□ -2.16
GYPB-207ENST00000506679 TUBGCP6Q96RT7 1819 aa1.55□□□□□ -2.16
GYPB-207ENST00000506679 IGHV3-74A0A0B4J1X5 117 aa1.55□□□□□ -2.16
GYPB-207ENST00000506679 IGHV5-10-1A0A0J9YXX1 117 aa1.55□□□□□ -2.16
GYPB-207ENST00000506679 COLCA2A8K830 154 aa1.55□□□□□ -2.16
GYPB-207ENST00000506679 FOXE1O00358 373 aaPredicted RBP1.55□□□□□ -2.16
GYPB-207ENST00000506679 UTS2O95399 124 aa1.55□□□□□ -2.16
GYPB-207ENST00000506679 CD5P06127 495 aa1.55□□□□□ -2.16
GYPB-207ENST00000506679 CT62P0C5K7 136 aa1.55□□□□□ -2.16
GYPB-207ENST00000506679 RHOXF2BP0C7M4 288 aa1.55□□□□□ -2.16
GYPB-207ENST00000506679 ZNF286BP0CG31 522 aa1.55□□□□□ -2.16
GYPB-207ENST00000506679 PGAM1P18669 254 aa1.55□□□□□ -2.16
GYPB-207ENST00000506679 KITLGP21583 273 aa1.55□□□□□ -2.16
GYPB-207ENST00000506679 SLC2A5P22732 501 aa1.55□□□□□ -2.16
GYPB-207ENST00000506679 HRH1P35367 487 aa1.55□□□□□ -2.16
GYPB-207ENST00000506679 SERPINB5P36952 375 aa1.55□□□□□ -2.16
GYPB-207ENST00000506679 CYB561P49447 251 aa1.55□□□□□ -2.16
GYPB-207ENST00000506679 CDH4P55283 916 aa1.55□□□□□ -2.16
GYPB-207ENST00000506679 ESRRGP62508 458 aa1.55□□□□□ -2.16
GYPB-207ENST00000506679 POU2AF1Q16633 256 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms