RNA–Protein interactions for RNA: ENST00000506089.1

SMARCAD1-205, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 4

Gene SMARCAD1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-205ENST00000506089 DEKP35659 375 aaKnown RBP3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 HMGCLP35914 325 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 HTR2BP41595 481 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 RGRP47804 291 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 RPL34P49207 117 aaKnown RBP3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 UBE2MP61081 183 aaKnown RBP3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 ERVK11-1P61568 191 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 STXBP1P61764 594 aaKnown RBP3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 RPS15AP62244 130 aaKnown RBP3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 LRRC63Q05C16 580 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 ECH1Q13011 328 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 CYLC2Q14093 348 aaPredicted RBP3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 PSMD5Q16401 504 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 RPEL1Q2QD12 228 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 PAN3Q58A45 887 aaKnown RBP3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 VAX1Q5SQQ9 334 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 TIGD3Q6B0B8 471 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 TMPRSS11AQ6ZMR5 421 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 Q6ZN92 141 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 TRMT10CQ7L0Y3 403 aaKnown RBP3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 OR2W3Q7Z3T1 314 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 SLC26A11Q86WA9 606 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 C17orf82Q86X59 251 aaPredicted RBP3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 SKA3Q8IX90 412 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 CADM2Q8N3J6 435 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 C17orf78Q8N4C9 275 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 TRAM1L1Q8N609 369 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 CSNK1G2-AS1Q8NCQ2 148 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 ZNF740Q8NDX6 193 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 CACNG8Q8WXS5 425 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 MRGPRFQ96AM1 343 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 APH1AQ96BI3 265 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 RNF170Q96K19 258 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 ART5Q96L15 291 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 TSSK3Q96PN8 268 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 DUX3Q96PT4 197 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 OSBPL10Q9BXB5 764 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 GFRA4Q9GZZ7 299 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 ISG20L2Q9H9L3 353 aaKnown RBP3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 EXD2Q9NVH0 621 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 RSPH14Q9UHP6 348 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 ZNF229Q9UJW7 825 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 MMP17Q9ULZ9 603 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 ING4Q9UNL4 249 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 RCL1Q9Y2P8 373 aaKnown RBP3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 UBN2Q6ZU65 1347 aa3.13□□□□□ -1.91
SMARCAD1-205ENST00000506089 CNTNAP1P78357 1384 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 GLYATL1P3A0A0U1RQE8 302 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 TSPAN11A1L157 253 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 SLC22A20A6NK97 555 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 SOCS3O14543 225 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 RFXANKO14593 260 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 SCAMP2O15127 329 aaKnown RBP3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 GPAA1O43292 621 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 GMDSO60547 372 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 SLC19A2O60779 497 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 CDK14O94921 469 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 VAPBO95292 243 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 LSM8O95777 96 aaKnown RBP3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 HBE1P02100 147 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 ACSM4P0C7M7 580 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 ZNF3P17036 446 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 VDAC1P21796 283 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 BGNP21810 368 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 IVDP26440 423 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 IL12BP29460 328 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 NTSP30990 170 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 UCNP55089 124 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 FCHO2Q0JRZ9 810 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 SERTAD2Q14140 314 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 TRMT5Q32P41 509 aaKnown RBP3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 TMEM30BQ3MIR4 351 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 NHLRC3Q5JS37 347 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 REG3GQ6UW15 175 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 TFAP2EQ6VUC0 442 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 ZNF571Q7Z3V5 609 aaPredicted RBP3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 PEX26Q7Z412 305 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 PRELID2Q8N945 189 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 OR5B3Q8NH48 314 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 CCDC26Q8TAB7 109 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 ITFG1Q8TB96 612 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 ZNF564Q8TBZ8 553 aaPredicted RBP3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 FGGYQ96C11 551 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 ITCHQ96J02 903 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 DNAJC1Q96KC8 554 aaKnown RBP3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 ZNF317Q96PQ6 595 aaPredicted RBP3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 OR5M11Q96RB7 305 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 PAIP2Q9BPZ3 127 aaKnown RBP3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 LLPHQ9BRT6 129 aaKnown RBP3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 PELOQ9BRX2 385 aaKnown RBP3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 MAP1LC3CQ9BXW4 147 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 NDEL1Q9GZM8 345 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 GOLPH3Q9H4A6 298 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 PATZ1Q9HBE1 687 aaKnown RBP3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 VCX3AQ9NNX9 186 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 MUTYHQ9UIF7 546 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 V9GY05 133 aa3.12□□□□□ -1.91
SMARCAD1-205ENST00000506089 COL22A1Q8NFW1 1626 aaPredicted RBP3.11□□□□□ -1.91
SMARCAD1-205ENST00000506089 RLFQ13129 1914 aa3.11□□□□□ -1.91
SMARCAD1-205ENST00000506089 IGLV3-22A0A075B6J6 115 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms