RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 CCKARP32238 428 aa11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 CRISP1P54107 249 aa11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 RAP1BP61224 184 aa11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 RAP1AP62834 184 aa11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 ARF1P84077 181 aaKnown RBP11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 CD47Q08722 323 aa11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 CEACAM16Q2WEN9 425 aa11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 PGGHGQ32M88 737 aa11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 FBXL19-AS1Q494R0 122 aa11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 SFRP5Q5T4F7 317 aa11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 RPL13AP3Q6NVV1 102 aa11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 ZBTB49Q6ZSB9 765 aa11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 C22orf34Q6ZV56 151 aa11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 GALNT4Q8N4A0 578 aa11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 ZNF433Q8N7K0 673 aaPredicted RBP11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 SDR9C7Q8NEX9 313 aa11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 OR52E2Q8NGJ4 325 aa11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 MCHR2Q969V1 340 aa11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 LRR1Q96L50 414 aa11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 FOXN4Q96NZ1 517 aa11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 NMNAT3Q96T66 252 aa11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 RBM4BQ9BQ04 359 aaKnown RBP11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 C9orf16Q9BUW7 83 aa11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 RBM4Q9BWF3 364 aaKnown RBP11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 ELOVL5Q9NYP7 299 aa11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 STX18Q9P2W9 335 aaKnown RBP11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 MALT1Q9UDY8 824 aa11.67□□□□□ -0.54
PDLIM7-212ENST00000504380 CREBBPQ92793 2442 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 A0A096LPE4 126 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 A0A1W2PPZ6 126 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 A0A1W2PR80 420 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 CIB4A0PJX0 185 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 SLC22A23A1A5C7 686 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 M0R129 80 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 XKRYO14609 159 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 ARPC3O15145 178 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 ALPLP05186 524 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 NOS3P29474 1203 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 UGT2B10P36537 528 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 GIPRP48546 466 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 ALDH3A2P51648 485 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 CDK5Q00535 292 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 SLC34A1Q06495 639 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 ITGADQ13349 1161 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 ETFDHQ16134 617 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 HIST3H3Q16695 136 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 ZNF362Q5T0B9 420 aaPredicted RBP11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 OTPQ5XKR4 325 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 HIST2H2BCQ6DN03 193 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 GPR139Q6DWJ6 353 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 ALKBH2Q6NS38 261 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 LEG1Q6P5S2 330 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 BHLHA15Q7RTS1 189 aaPredicted RBP11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 LNX2Q8N448 690 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 CYB561A3Q8NBI2 242 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 OR2T33Q8NG76 320 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 LINC01560Q8TB33 94 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 DNAJC9Q8WXX5 260 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 KISS1RQ969F8 398 aaPredicted RBP11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 NMD3Q96D46 503 aaKnown RBP11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 TSSK2Q96PF2 358 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 RERGLQ9H628 205 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 RNPEPL1Q9HAU8 725 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 B3GAT2Q9NPZ5 323 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 USE1Q9NZ43 259 aa11.66□□□□□ -0.54
PDLIM7-212ENST00000504380 PRSS37A4D1T9 235 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 OR6C65A6NJZ3 312 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 FAM171A2A8MVW0 826 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 C16orf97H3BN30 126 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 DHHO43323 396 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 MGRN1O60291 552 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 GPANK1O95872 356 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 APEHP13798 732 aaKnown RBP11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 COX5AP20674 150 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 IL32P24001 234 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 MPGP29372 298 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 CDAP32320 146 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 GRK5P34947 590 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 PTGES3Q15185 160 aaKnown RBP11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 STK11Q15831 433 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 HIKESHIQ53FT3 197 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 FAM205BPQ63HN1 556 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 SLC27A4Q6P1M0 643 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 SLC25A47Q6Q0C1 308 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 HDDC2Q7Z4H3 204 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 JAZF1Q86VZ6 243 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 PARP8Q8N3A8 854 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 SLC37A3Q8NCC5 494 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 NPEPL1Q8NDH3 523 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 OR1K1Q8NGR3 316 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 NRG4Q8WWG1 115 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 S100PBPQ96BU1 408 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 LRRC46Q96FV0 321 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 ZC3HAV1LQ96H79 300 aaKnown RBP11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 RBP7Q96R05 134 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 MBOAT4Q96T53 435 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 ALG12Q9BV10 488 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 ACTR6Q9GZN1 396 aa11.65□□□□□ -0.54
PDLIM7-212ENST00000504380 SYT4Q9H2B2 425 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms