RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 RNF114Q9Y508 228 aa13.33□□□□□ -0.28
PDLIM7-210ENST00000503827 TRAV40A0A0B4J280 105 aa13.32□□□□□ -0.28
PDLIM7-210ENST00000503827 ERLIN1O75477 346 aa13.32□□□□□ -0.28
PDLIM7-210ENST00000503827 CD80P33681 288 aa13.32□□□□□ -0.28
PDLIM7-210ENST00000503827 SEC61A1P61619 476 aaKnown RBP13.32□□□□□ -0.28
PDLIM7-210ENST00000503827 DEFB112Q30KQ8 113 aa13.32□□□□□ -0.28
PDLIM7-210ENST00000503827 TMEM155Q4W5P6 130 aa13.32□□□□□ -0.28
PDLIM7-210ENST00000503827 ESCO2Q56NI9 601 aa13.32□□□□□ -0.28
PDLIM7-210ENST00000503827 TMEM53Q6P2H8 277 aa13.32□□□□□ -0.28
PDLIM7-210ENST00000503827 SERPINA11Q86U17 422 aa13.32□□□□□ -0.28
PDLIM7-210ENST00000503827 CLIP4Q8N3C7 705 aa13.32□□□□□ -0.28
PDLIM7-210ENST00000503827 TRIML2Q8N7C3 387 aa13.32□□□□□ -0.28
PDLIM7-210ENST00000503827 OR1J1Q8NGS3 322 aa13.32□□□□□ -0.28
PDLIM7-210ENST00000503827 UPRTQ96BW1 309 aa13.32□□□□□ -0.28
PDLIM7-210ENST00000503827 TXNDC15Q96J42 360 aa13.32□□□□□ -0.28
PDLIM7-210ENST00000503827 PRDM13Q9H4Q3 707 aa13.32□□□□□ -0.28
PDLIM7-210ENST00000503827 CACYBPQ9HB71 228 aaKnown RBP13.32□□□□□ -0.28
PDLIM7-210ENST00000503827 TCF7L1Q9HCS4 588 aa13.32□□□□□ -0.28
PDLIM7-210ENST00000503827 TCF7L2Q9NQB0 619 aa13.32□□□□□ -0.28
PDLIM7-210ENST00000503827 RPS6KB2Q9UBS0 482 aa13.32□□□□□ -0.28
PDLIM7-210ENST00000503827 IL20RAQ9UHF4 553 aa13.32□□□□□ -0.28
PDLIM7-210ENST00000503827 ZNF443Q9Y2A4 671 aaPredicted RBP13.32□□□□□ -0.28
PDLIM7-210ENST00000503827 DOCK11Q5JSL3 2073 aa13.32□□□□□ -0.28
PDLIM7-210ENST00000503827 TRAV36DV7A0A075B6V5 113 aa13.31□□□□□ -0.28
PDLIM7-210ENST00000503827 MFN2O95140 757 aa13.31□□□□□ -0.28
PDLIM7-210ENST00000503827 FARS2O95363 451 aaKnown RBP13.31□□□□□ -0.28
PDLIM7-210ENST00000503827 HPRP00739 348 aa13.31□□□□□ -0.28
PDLIM7-210ENST00000503827 CSNK1A1P48729 337 aa13.31□□□□□ -0.28
PDLIM7-210ENST00000503827 MMP15P51511 669 aa13.31□□□□□ -0.28
PDLIM7-210ENST00000503827 SMU1Q2TAY7 513 aa13.31□□□□□ -0.28
PDLIM7-210ENST00000503827 BEAN1Q3B7T3 259 aa13.31□□□□□ -0.28
PDLIM7-210ENST00000503827 ZNF718Q3SXZ3 478 aa13.31□□□□□ -0.28
PDLIM7-210ENST00000503827 BTNL3Q6UXE8 466 aa13.31□□□□□ -0.28
PDLIM7-210ENST00000503827 LRRN1Q6UXK5 716 aa13.31□□□□□ -0.28
PDLIM7-210ENST00000503827 REC114Q7Z4M0 266 aa13.31□□□□□ -0.28
PDLIM7-210ENST00000503827 DPPA2Q7Z7J5 298 aa13.31□□□□□ -0.28
PDLIM7-210ENST00000503827 NOA1Q8NC60 698 aaKnown RBP13.31□□□□□ -0.28
PDLIM7-210ENST00000503827 TESCQ96BS2 214 aa13.31□□□□□ -0.28
PDLIM7-210ENST00000503827 MARCH7Q9H992 704 aa13.31□□□□□ -0.28
PDLIM7-210ENST00000503827 CYSLTR2Q9NS75 346 aa13.31□□□□□ -0.28
PDLIM7-210ENST00000503827 CALML5Q9NZT1 146 aa13.31□□□□□ -0.28
PDLIM7-210ENST00000503827 ASH2LQ9UBL3 628 aa13.31□□□□□ -0.28
PDLIM7-210ENST00000503827 A0A087WUJ7 227 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 IQCMA0A1B0GVH7 501 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 CCDC154A6NI56 674 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 CLPXO76031 633 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 ADH4P08319 380 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 KRT4P19013 534 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 ALDH3A1P30838 453 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 LIPAP38571 399 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 PLP2Q04941 152 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 C2orf68Q2NKX9 166 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 DPY19L1Q2PZI1 675 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 SPANXN4Q5MJ08 99 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 COX20Q5RI15 118 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 C6orf89Q6UWU4 347 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 OR10S1Q8NGN2 331 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 GEMIN6Q8WXD5 167 aaKnown RBP13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 PANX1Q96RD7 426 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 SH3GL3Q99963 347 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 SPATA9Q9BWV2 254 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 ASPNQ9BXN1 380 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 CHIAQ9BZP6 476 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 NANOGQ9H9S0 305 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 C12orf10Q9HB07 376 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 NOX4Q9NPH5 578 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 P2RX2Q9UBL9 471 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 BTNL2Q9UIR0 455 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 ZDHHC8Q9ULC8 765 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 PYCARDQ9ULZ3 195 aa13.3□□□□□ -0.28
PDLIM7-210ENST00000503827 ZSCAN5BA6NJL1 495 aa13.29□□□□□ -0.28
PDLIM7-210ENST00000503827 G3V4G9 280 aa13.29□□□□□ -0.28
PDLIM7-210ENST00000503827 TGDSO95455 350 aa13.29□□□□□ -0.28
PDLIM7-210ENST00000503827 MYZAPP0CAP1 466 aa13.29□□□□□ -0.28
PDLIM7-210ENST00000503827 S100A3P33764 101 aa13.29□□□□□ -0.28
PDLIM7-210ENST00000503827 CRISP3P54108 245 aa13.29□□□□□ -0.28
PDLIM7-210ENST00000503827 RPL15P61313 204 aaKnown RBP13.29□□□□□ -0.28
PDLIM7-210ENST00000503827 MAPK11Q15759 364 aa13.29□□□□□ -0.28
PDLIM7-210ENST00000503827 SLC36A2Q495M3 483 aa13.29□□□□□ -0.28
PDLIM7-210ENST00000503827 Q6YL49 198 aa13.29□□□□□ -0.28
PDLIM7-210ENST00000503827 LRRC28Q86X40 367 aaPredicted RBP13.29□□□□□ -0.28
PDLIM7-210ENST00000503827 TMEM86BQ8N661 226 aa13.29□□□□□ -0.28
PDLIM7-210ENST00000503827 SCAIQ8N9R8 606 aa13.29□□□□□ -0.28
PDLIM7-210ENST00000503827 SLC41A3Q96GZ6 507 aa13.29□□□□□ -0.28
PDLIM7-210ENST00000503827 CCDC115Q96NT0 180 aa13.29□□□□□ -0.28
PDLIM7-210ENST00000503827 SLC6A13Q9NSD5 602 aa13.29□□□□□ -0.28
PDLIM7-210ENST00000503827 TMEM106BQ9NUM4 274 aa13.29□□□□□ -0.28
PDLIM7-210ENST00000503827 TMEM38BQ9NVV0 291 aa13.29□□□□□ -0.28
PDLIM7-210ENST00000503827 DCAF16Q9NXF7 216 aa13.29□□□□□ -0.28
PDLIM7-210ENST00000503827 KLHL14Q9P2G3 628 aa13.29□□□□□ -0.28
PDLIM7-210ENST00000503827 CGGBP1Q9UFW8 167 aaPredicted RBP13.29□□□□□ -0.28
PDLIM7-210ENST00000503827 LRCH1Q9Y2L9 728 aa13.29□□□□□ -0.28
PDLIM7-210ENST00000503827 TET2Q6N021 2002 aaPredicted RBP13.29□□□□□ -0.28
PDLIM7-210ENST00000503827 C5orf63A6NC05 138 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 F5H0A9 414 aaPredicted RBP13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 PRB2P02812 416 aaPredicted RBP13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 CD55P08174 381 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 APLNRP35414 380 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 SERPINB5P36952 375 aa13.28□□□□□ -0.28
PDLIM7-210ENST00000503827 CLNS1AP54105 237 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms