RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 NOS1APO75052 506 aaPredicted RBP10.48□□□□□ -0.73
USP46-204ENST00000503060 DIRAS3O95661 229 aa10.48□□□□□ -0.73
USP46-204ENST00000503060 TPOP07202 933 aa10.48□□□□□ -0.73
USP46-204ENST00000503060 OR2T7P0C7T2 308 aa10.48□□□□□ -0.73
USP46-204ENST00000503060 GP1BBP13224 206 aa10.48□□□□□ -0.73
USP46-204ENST00000503060 CXCR1P25024 350 aa10.48□□□□□ -0.73
USP46-204ENST00000503060 G0S2P27469 103 aa10.48□□□□□ -0.73
USP46-204ENST00000503060 NAA10P41227 235 aaPredicted RBP10.48□□□□□ -0.73
USP46-204ENST00000503060 MECP2P51608 486 aaKnown RBP10.48□□□□□ -0.73
USP46-204ENST00000503060 HCCSP53701 268 aa10.48□□□□□ -0.73
USP46-204ENST00000503060 CTXN1P60606 82 aa10.48□□□□□ -0.73
USP46-204ENST00000503060 E2F1Q01094 437 aa10.48□□□□□ -0.73
USP46-204ENST00000503060 PCGF3Q3KNV8 242 aa10.48□□□□□ -0.73
USP46-204ENST00000503060 DDI2Q5TDH0 399 aa10.48□□□□□ -0.73
USP46-204ENST00000503060 TRAT1Q6PIZ9 186 aa10.48□□□□□ -0.73
USP46-204ENST00000503060 OVCH1Q7RTY7 1134 aa10.48□□□□□ -0.73
USP46-204ENST00000503060 FAM122BQ7Z309 247 aa10.48□□□□□ -0.73
USP46-204ENST00000503060 CCDC28AQ8IWP9 274 aa10.48□□□□□ -0.73
USP46-204ENST00000503060 SLC35F2Q8IXU6 374 aa10.48□□□□□ -0.73
USP46-204ENST00000503060 RFLNBQ8N5W9 214 aa10.48□□□□□ -0.73
USP46-204ENST00000503060 OR2I1PQ8NGU4 316 aa10.48□□□□□ -0.73
USP46-204ENST00000503060 OR2T27Q8NH04 317 aa10.48□□□□□ -0.73
USP46-204ENST00000503060 TAAR8Q969N4 342 aa10.48□□□□□ -0.73
USP46-204ENST00000503060 LPAR4Q99677 370 aa10.48□□□□□ -0.73
USP46-204ENST00000503060 MESP1Q9BRJ9 268 aa10.48□□□□□ -0.73
USP46-204ENST00000503060 OPA3Q9H6K4 179 aa10.48□□□□□ -0.73
USP46-204ENST00000503060 SMAD9O15198 467 aaKnown RBP10.47□□□□□ -0.73
USP46-204ENST00000503060 EFSO43281 561 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 RAB3DO95716 219 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 PTBP3O95758 552 aaKnown RBP10.47□□□□□ -0.73
USP46-204ENST00000503060 NUDT14O95848 222 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 ONECUT2O95948 504 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 PTTG1O95997 202 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 CDKN2AP42771 156 aaKnown RBP10.47□□□□□ -0.73
USP46-204ENST00000503060 ZNF41P51814 821 aaPredicted RBP10.47□□□□□ -0.73
USP46-204ENST00000503060 NRG3P56975 720 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 SPCS3P61009 180 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 IL10RAQ13651 578 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 CBFBQ13951 182 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 TRAM1Q15629 374 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 ZNF79Q15937 498 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 AGAP7PQ5VUJ5 663 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 LEG1Q6P5S2 330 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 APCDD1LQ8NCL9 501 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 OR5J2Q8NH18 312 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 AKR7LQ8NHP1 331 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 FKRPQ9H9S5 495 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 A0A1W2PRV1 198 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 VSTM2BA6NLU5 285 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 C4orf47A7E2U8 309 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 ADAM10O14672 748 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 LDLRAD4O15165 306 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 SERPINI2O75830 405 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 NCR1O76036 304 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 TXNDC12O95881 172 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 BGLAPP02818 100 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 HIST1H2ABP04908 130 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 F8A1P23610 371 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 SDHAP31040 664 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 PYCR1P32322 319 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 RPS5P46782 204 aaKnown RBP10.47□□□□□ -0.73
USP46-204ENST00000503060 ZNF81P51508 661 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 P2RX1P51575 399 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 CCR9P51686 369 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 SLC25A1P53007 311 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 EMP2P54851 167 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 DEFA1P59665 94 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 DEFA3P59666 94 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 RPL18Q07020 188 aaKnown RBP10.47□□□□□ -0.73
USP46-204ENST00000503060 SLC3A1Q07837 685 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 TRA2AQ13595 282 aaKnown RBP eCLIP10.47□□□□□ -0.73
USP46-204ENST00000503060 TP53I3Q53FA7 332 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 DMKNQ6E0U4 476 aaPredicted RBP10.47□□□□□ -0.73
USP46-204ENST00000503060 C16orf47Q6ZP98 133 aaPredicted RBP10.47□□□□□ -0.73
USP46-204ENST00000503060 HIST3H2AQ7L7L0 130 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 ELMOD2Q8IZ81 293 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 SYS1Q8N2H4 156 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 NLGN4YQ8NFZ3 816 aaPredicted RBP10.47□□□□□ -0.73
USP46-204ENST00000503060 TTC9Q92623 222 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 HIST1H2ACQ93077 130 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 PHF21AQ96BD5 680 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 TTTY10Q9BZA0 68 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 SRRQ9GZT4 340 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 RNF32Q9H0A6 362 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 CPNE5Q9HCH3 593 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 C14orf119Q9NWQ9 140 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 STMN3Q9NZ72 180 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 ST6GALNAC2Q9UJ37 374 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 PPIEQ9UNP9 301 aaKnown RBP10.47□□□□□ -0.73
USP46-204ENST00000503060 NPFFR2Q9Y5X5 522 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 USP34Q70CQ2 3546 aa10.47□□□□□ -0.73
USP46-204ENST00000503060 MPDZO75970 2070 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 TRAV36DV7A0A075B6V5 113 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 PATE3B3GLJ2 98 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 SELENOFO60613 162 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 GLCEO94923 617 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 F13BP05160 661 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 LIPFP07098 398 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 RAB4AP20338 218 aa10.46□□□□□ -0.73
USP46-204ENST00000503060 MTNR1BP49286 362 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms