RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 SLC26A1Q9H2B4 701 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 GAREM1Q9H706 876 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 RANGRFQ9HD47 186 aaPredicted RBP11.75□□□□□ -0.53
GARNL3-220ENST00000496711 APMAPQ9HDC9 416 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 PRMT8Q9NR22 394 aaPredicted RBP11.75□□□□□ -0.53
GARNL3-220ENST00000496711 SLCO1C1Q9NYB5 712 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 KLRF1Q9NZS2 232 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 ING1Q9UK53 422 aaPredicted RBP11.75□□□□□ -0.53
GARNL3-220ENST00000496711 ITGB1BP2Q9UKP3 347 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 FREM3P0C091 2139 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 A0A1B0GTH9 108 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 ZNF593O00488 134 aaPredicted RBP11.74□□□□□ -0.53
GARNL3-220ENST00000496711 GSTZ1O43708 216 aaPredicted RBP11.74□□□□□ -0.53
GARNL3-220ENST00000496711 CFIP05156 583 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 CYC1P08574 325 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 SPARCP09486 303 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 CD3GP09693 182 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 TDGF1P13385 188 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 ARSBP15848 533 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 CTLA4P16410 223 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 IL11P20809 199 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 DPP4P27487 766 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 CCKBRP32239 447 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 SRP9P49458 86 aaKnown RBP11.74□□□□□ -0.53
GARNL3-220ENST00000496711 BTG1P62324 171 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 PUDPQ08623 228 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 FOXF1Q12946 379 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 NTRK2Q16620 822 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 RNASE12Q5GAN4 147 aaKnown RBP11.74□□□□□ -0.53
GARNL3-220ENST00000496711 PHF19Q5T6S3 580 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 SLC18B1Q6NT16 456 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 FDX2Q6P4F2 183 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 TMEM205Q6UW68 189 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 CMTM4Q8IZR5 234 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 PRSS35Q8N3Z0 413 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 ZNF248Q8NDW4 579 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 MFSD8Q8NHS3 518 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 MAFAQ8NHW3 353 aaPredicted RBP11.74□□□□□ -0.53
GARNL3-220ENST00000496711 IFI44Q8TCB0 444 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 GPR148Q8TDV2 347 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 SMIM4Q8WVI0 70 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 THRSPQ92748 146 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 EDAQ92838 391 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 ITFG2Q969R8 447 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 RELTQ969Z4 430 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 DDIT4LQ96D03 193 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 NXPE2Q96DL1 559 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 SLC25A38Q96DW6 304 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 C4orf45Q96LM5 186 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 GUCD1Q96NT3 240 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 FOXN4Q96NZ1 517 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 DCBLD2Q96PD2 775 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 NPAS1Q99742 590 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 LIN7BQ9HAP6 207 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 PRDM6Q9NQX0 595 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 MRPL22Q9NWU5 206 aaKnown RBP11.74□□□□□ -0.53
GARNL3-220ENST00000496711 MED11Q9P086 117 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 VDAC3Q9Y277 283 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 MRPS7Q9Y2R9 242 aaKnown RBP11.74□□□□□ -0.53
GARNL3-220ENST00000496711 TRBV5-7A0A0A0MS05 114 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 A6NIZ1 184 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 ZNF208O43345 1280 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 ZFAND5O76080 213 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 RAF1P04049 648 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 CALCBP10092 127 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 CRABP1P29762 137 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 KIR3DL2P43630 455 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 DAP3P51398 398 aaKnown RBP11.74□□□□□ -0.53
GARNL3-220ENST00000496711 RAP1BP61224 184 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 RAP1AP62834 184 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 ADAM8P78325 824 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 MRPS15P82914 257 aaKnown RBP11.74□□□□□ -0.53
GARNL3-220ENST00000496711 CD83Q01151 205 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 ZP4Q12836 540 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 SLC17A1Q14916 467 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 OR7A5Q15622 319 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 MEP1BQ16820 701 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 WDR38Q5JTN6 314 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 LCN10Q6JVE6 187 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 ARSKQ6UWY0 536 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 LRRN1Q6UXK5 716 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 SLC35D2Q76EJ3 337 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 SLC22A8Q8TCC7 542 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 ASB10Q8WXI3 467 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 C8orf44Q96CB5 159 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 FYTTD1Q96QD9 318 aaKnown RBP11.74□□□□□ -0.53
GARNL3-220ENST00000496711 C7orf50Q9BRJ6 194 aaKnown RBP11.74□□□□□ -0.53
GARNL3-220ENST00000496711 DPAGT1Q9H3H5 408 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 OCIAD1Q9NX40 245 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 PPP4R1LQ9P1A2 415 aa11.74□□□□□ -0.53
GARNL3-220ENST00000496711 RBMX2Q9Y388 322 aaKnown RBP11.74□□□□□ -0.53
GARNL3-220ENST00000496711 ALPK2Q86TB3 2170 aa11.73□□□□□ -0.53
GARNL3-220ENST00000496711 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.73□□□□□ -0.53
GARNL3-220ENST00000496711 NPIPA5E9PKD4 350 aa11.73□□□□□ -0.53
GARNL3-220ENST00000496711 ETV2O00321 342 aaPredicted RBP11.73□□□□□ -0.53
GARNL3-220ENST00000496711 GPR171O14626 319 aa11.73□□□□□ -0.53
GARNL3-220ENST00000496711 ADRB1P08588 477 aa11.73□□□□□ -0.53
GARNL3-220ENST00000496711 FGF5P12034 268 aa11.73□□□□□ -0.53
GARNL3-220ENST00000496711 HLA-DOBP13765 273 aa11.73□□□□□ -0.53
GARNL3-220ENST00000496711 ZNF41P51814 821 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms