RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ZNF587BE7ETH6 402 aa19.2■□□□□ 0.66
C9orf3-222ENST00000496567 M0R3G1 203 aa19.2■□□□□ 0.66
C9orf3-222ENST00000496567 DLGAP1O14490 977 aa19.2■□□□□ 0.66
C9orf3-222ENST00000496567 ZNF3P17036 446 aa19.2■□□□□ 0.66
C9orf3-222ENST00000496567 ASCL1P50553 236 aa19.2■□□□□ 0.66
C9orf3-222ENST00000496567 FAPQ12884 760 aa19.2■□□□□ 0.66
C9orf3-222ENST00000496567 PTCHD4Q6ZW05 846 aa19.2■□□□□ 0.66
C9orf3-222ENST00000496567 ZNF555Q8NEP9 628 aa19.2■□□□□ 0.66
C9orf3-222ENST00000496567 HRASLS5Q96KN8 279 aa19.2■□□□□ 0.66
C9orf3-222ENST00000496567 ALKBH3Q96Q83 286 aaPredicted RBP19.2■□□□□ 0.66
C9orf3-222ENST00000496567 NMNAT3Q96T66 252 aa19.2■□□□□ 0.66
C9orf3-222ENST00000496567 FAM118AQ9NWS6 357 aa19.2■□□□□ 0.66
C9orf3-222ENST00000496567 TVP23BQ9NYZ1 205 aa19.2■□□□□ 0.66
C9orf3-222ENST00000496567 SLC22A23A1A5C7 686 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 RPL36A-HNRNPH2H7BZ11 118 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 H7C1C5 153 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 SURF4O15260 269 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 QDPRP09417 244 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 CDC42P60953 191 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 LCN6P62502 163 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 LGALS3BPQ08380 585 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 SNAPC1Q16533 368 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 C12orf73Q69YU5 71 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 ZNF474Q6S9Z5 364 aaPredicted RBP19.19■□□□□ 0.66
C9orf3-222ENST00000496567 SDR9C7Q8NEX9 313 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 MCHR2Q969V1 340 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 LRRC46Q96FV0 321 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 KCNJ16Q9NPI9 418 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 FAM90A27PA6NNH2 459 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 CLDN14O95500 239 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 ROR2Q01974 943 aaKnown RBP19.19■□□□□ 0.66
C9orf3-222ENST00000496567 P2RY6Q15077 328 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 PHYHD1Q5SRE7 291 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 ZNF362Q5T0B9 420 aaPredicted RBP19.19■□□□□ 0.66
C9orf3-222ENST00000496567 GABRG1Q8N1C3 465 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 DHRSXQ8N5I4 330 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 SLC37A3Q8NCC5 494 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 NPEPL1Q8NDH3 523 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 RBM24Q9BX46 236 aaKnown RBP19.19■□□□□ 0.66
C9orf3-222ENST00000496567 SYT4Q9H2B2 425 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 CRLF2Q9HC73 371 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 GPR35Q9HC97 309 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 ELOVL5Q9NYP7 299 aa19.19■□□□□ 0.66
C9orf3-222ENST00000496567 NDRG4Q9ULP0 352 aaKnown RBP19.19■□□□□ 0.66
C9orf3-222ENST00000496567 FREM1Q5H8C1 2179 aa19.18■□□□□ 0.66
C9orf3-222ENST00000496567 UBR5O95071 2799 aaPredicted RBP19.18■□□□□ 0.66
C9orf3-222ENST00000496567 LOC100130705A0A1B0GUX0 176 aa19.18■□□□□ 0.66
C9orf3-222ENST00000496567 E9PQ18 207 aa19.18■□□□□ 0.66
C9orf3-222ENST00000496567 SLC16A6O15403 523 aa19.18■□□□□ 0.66
C9orf3-222ENST00000496567 SLC2A10O95528 541 aa19.18■□□□□ 0.66
C9orf3-222ENST00000496567 PAICSP22234 425 aaKnown RBP19.18■□□□□ 0.66
C9orf3-222ENST00000496567 MPGP29372 298 aa19.18■□□□□ 0.66
C9orf3-222ENST00000496567 CRABP1P29762 137 aa19.18■□□□□ 0.66
C9orf3-222ENST00000496567 GGT2P36268 569 aa19.18■□□□□ 0.66
C9orf3-222ENST00000496567 ZNF133P52736 654 aaPredicted RBP19.18■□□□□ 0.66
C9orf3-222ENST00000496567 STK11Q15831 433 aa19.18■□□□□ 0.66
C9orf3-222ENST00000496567 TTC23Q5W5X9 447 aa19.18■□□□□ 0.66
C9orf3-222ENST00000496567 LRFN4Q6PJG9 635 aa19.18■□□□□ 0.66
C9orf3-222ENST00000496567 DNM1P34Q6PK57 102 aa19.18■□□□□ 0.66
C9orf3-222ENST00000496567 FAM26EQ8N5C1 309 aa19.18■□□□□ 0.66
C9orf3-222ENST00000496567 NMD3Q96D46 503 aaKnown RBP19.18■□□□□ 0.66
C9orf3-222ENST00000496567 GMPPBQ9Y5P6 360 aa19.18■□□□□ 0.66
C9orf3-222ENST00000496567 MYO18BQ8IUG5 2567 aa19.17■□□□□ 0.66
C9orf3-222ENST00000496567 WIPF3A6NGB9 483 aa19.17■□□□□ 0.66
C9orf3-222ENST00000496567 DHHO43323 396 aa19.17■□□□□ 0.66
C9orf3-222ENST00000496567 TGFBR3Q03167 851 aa19.17■□□□□ 0.66
C9orf3-222ENST00000496567 KEAP1Q14145 624 aa19.17■□□□□ 0.66
C9orf3-222ENST00000496567 CRMP1Q14194 572 aa19.17■□□□□ 0.66
C9orf3-222ENST00000496567 FBXL19-AS1Q494R0 122 aa19.17■□□□□ 0.66
C9orf3-222ENST00000496567 C10orf128Q5T292 105 aa19.17■□□□□ 0.66
C9orf3-222ENST00000496567 LINGO2Q7L985 606 aa19.17■□□□□ 0.66
C9orf3-222ENST00000496567 CYGBQ8WWM9 190 aa19.17■□□□□ 0.66
C9orf3-222ENST00000496567 DDOQ99489 341 aa19.17■□□□□ 0.66
C9orf3-222ENST00000496567 PITX2Q99697 317 aa19.17■□□□□ 0.66
C9orf3-222ENST00000496567 TAS2R16Q9NYV7 291 aa19.17■□□□□ 0.66
C9orf3-222ENST00000496567 OR6C68A6NDL8 312 aa19.16■□□□□ 0.66
C9orf3-222ENST00000496567 COX5AP20674 150 aa19.16■□□□□ 0.66
C9orf3-222ENST00000496567 PCYT1AP49585 367 aa19.16■□□□□ 0.66
C9orf3-222ENST00000496567 ZNF84P51523 738 aa19.16■□□□□ 0.66
C9orf3-222ENST00000496567 AQP4P55087 323 aa19.16■□□□□ 0.66
C9orf3-222ENST00000496567 SH3BGRP55822 239 aaPredicted RBP19.16■□□□□ 0.66
C9orf3-222ENST00000496567 FMODQ06828 376 aa19.16■□□□□ 0.66
C9orf3-222ENST00000496567 CEACAM16Q2WEN9 425 aa19.16■□□□□ 0.66
C9orf3-222ENST00000496567 CYB561A3Q8NBI2 242 aa19.16■□□□□ 0.66
C9orf3-222ENST00000496567 FAM81AQ8TBF8 368 aa19.16■□□□□ 0.66
C9orf3-222ENST00000496567 ADI1Q9BV57 179 aa19.16■□□□□ 0.66
C9orf3-222ENST00000496567 NUAK2Q9H093 628 aa19.16■□□□□ 0.66
C9orf3-222ENST00000496567 FN3KQ9H479 309 aa19.16■□□□□ 0.66
C9orf3-222ENST00000496567 RPRD1BQ9NQG5 326 aaKnown RBP19.16■□□□□ 0.66
C9orf3-222ENST00000496567 IMPAD1Q9NX62 359 aa19.16■□□□□ 0.66
C9orf3-222ENST00000496567 NKX2-6A6NCS4 301 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 PRR23D1E9PI22 279 aaPredicted RBP19.15■□□□□ 0.66
C9orf3-222ENST00000496567 H0YAE9 185 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 SLC16A7O60669 478 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 PRR23D2P0DMB1 279 aaPredicted RBP19.15■□□□□ 0.66
C9orf3-222ENST00000496567 IGHV1-2P23083 117 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 CD79BP40259 229 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 CDSNQ15517 529 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 SLC25A47Q6Q0C1 308 aa19.15■□□□□ 0.66
C9orf3-222ENST00000496567 IZUMO2Q6UXV1 221 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms