RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 ZSCAN26Q16670 478 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 TRMT12Q53H54 448 aaKnown RBP5.67□□□□□ -1.5
VIM-207ENST00000495528 FAM91A1Q658Y4 838 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 REP15Q6BDI9 236 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 NANOGP8Q6NSW7 305 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 SLC30A6Q6NXT4 461 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 ENPP6Q6UWR7 440 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 DLEU7Q6UYE1 221 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 ZNF550Q7Z398 422 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 C6orf120Q7Z4R8 191 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 C17orf47Q8NEP4 570 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 OR7G1Q8NGA0 311 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 OR9A2Q8NGT5 310 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 LRRC58Q96CX6 371 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 OMA1Q96E52 524 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 ZBED6CLQ96FA7 236 aaPredicted RBP5.67□□□□□ -1.5
VIM-207ENST00000495528 LYZL4Q96KX0 146 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 ZNF570Q96NI8 536 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 CCDC115Q96NT0 180 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 PIGQQ9BRB3 760 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 TMEM204Q9BSN7 226 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 OSBPL11Q9BXB4 747 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 ITPAQ9BY32 194 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 OR2B2Q9GZK3 357 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 NANOGQ9H9S0 305 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 SLC6A13Q9NSD5 602 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 ACSS1Q9NUB1 689 aaPredicted RBP5.67□□□□□ -1.5
VIM-207ENST00000495528 GID8Q9NWU2 228 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 ZNF226Q9NYT6 803 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 TAS2R9Q9NYW1 312 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 TAS2R1Q9NYW7 299 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 KLRF1Q9NZS2 232 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 BCAP29Q9UHQ4 241 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 BTNL2Q9UIR0 455 aa5.67□□□□□ -1.5
VIM-207ENST00000495528 DOCK7Q96N67 2140 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 A0A096LPI6 279 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 BBIP1A8MTZ0 92 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 B4DXG7 233 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 GYG2O15488 501 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 EMC8O43402 210 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 HCRTR2O43614 444 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 ZIC3O60481 467 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 CRLF1O75462 422 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 SERPINI2O75830 405 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 NPPAP01160 153 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 CGAP01215 116 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 KRT16P08779 473 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 UBL4AP11441 157 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 ZNF708P17019 499 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 UQCRC2P22695 453 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 TCEA1P23193 301 aaKnown RBP5.66□□□□□ -1.5
VIM-207ENST00000495528 LOXP28300 417 aaPredicted RBP5.66□□□□□ -1.5
VIM-207ENST00000495528 CCKARP32238 428 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 SOAT1P35610 550 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 CHI3L1P36222 383 aaPredicted RBP5.66□□□□□ -1.5
VIM-207ENST00000495528 CD79BP40259 229 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 CCR9P51686 369 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 CLDN18P56856 261 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 PSME3P61289 254 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 EEF1A1P68104 462 aaKnown RBP5.66□□□□□ -1.5
VIM-207ENST00000495528 LRRC74AQ0VAA2 488 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 SNTA1Q13424 505 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 EXOSC7Q15024 291 aaKnown RBP5.66□□□□□ -1.5
VIM-207ENST00000495528 TSTQ16762 297 aaKnown RBP5.66□□□□□ -1.5
VIM-207ENST00000495528 GTDC1Q4AE62 458 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 EEF1A1P5Q5VTE0 462 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 OR5M10Q6IEU7 315 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 TMEM107Q6UX40 140 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 MSANTD1Q6ZTZ1 278 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 ZNF771Q7L3S4 317 aaPredicted RBP5.66□□□□□ -1.5
VIM-207ENST00000495528 SHFQ7M4L6 423 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 SZRD1Q7Z422 152 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 P4HA3Q7Z4N8 544 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 IFNEQ86WN2 208 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 GRAMD2AQ8IUY3 354 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 IQCF1Q8N6M8 205 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 CNEP1R1Q8N9A8 125 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 RBM15BQ8NDT2 890 aaKnown RBP5.66□□□□□ -1.5
VIM-207ENST00000495528 OR7G2Q8NG99 324 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 OR5AK3PQ8NH89 298 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 PNPT1Q8TCS8 783 aaKnown RBP5.66□□□□□ -1.5
VIM-207ENST00000495528 TMED6Q8WW62 240 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 FIG4Q92562 907 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 ROPN1LQ96C74 230 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 AURKBQ96GD4 344 aaPredicted RBP5.66□□□□□ -1.5
VIM-207ENST00000495528 C16orf58Q96GQ5 468 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 CDRT15Q96T59 188 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 CGREF1Q99674 301 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 HOPXQ9BPY8 73 aaPredicted RBP5.66□□□□□ -1.5
VIM-207ENST00000495528 SLC39A3Q9BRY0 314 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 BTBD10Q9BSF8 475 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 MED18Q9BUE0 208 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 THUMPD3Q9BV44 507 aaKnown RBP5.66□□□□□ -1.5
VIM-207ENST00000495528 OPN3Q9H1Y3 402 aaPredicted RBP5.66□□□□□ -1.5
VIM-207ENST00000495528 C3orf14Q9HBI5 128 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 TAS2R10Q9NYW0 307 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 SLC25A37Q9NYZ2 338 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 VAPAQ9P0L0 249 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 ZNF639Q9UID6 485 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 FBXL2Q9UKC9 423 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms