RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 ZNF84P51523 738 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 RUNX1T1Q06455 604 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 KRR1Q13601 381 aaKnown RBP15.04■□□□□ -0
HDAC6-235ENST00000495515 TSC22D1Q15714 1073 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 GABRA6Q16445 453 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 HIST3H3Q16695 136 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 SLC36A3Q495N2 470 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 CLEC12AQ5QGZ9 265 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 TIMM23BQ5SRD1 257 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 THEM4Q5T1C6 240 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 ANKRD34AQ69YU3 496 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 ANKRD16Q6P6B7 361 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 KLHL17Q6TDP4 642 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 KLHL24Q6TFL4 600 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 ZNF771Q7L3S4 317 aaPredicted RBP15.04■□□□□ -0
HDAC6-235ENST00000495515 JAZF1Q86VZ6 243 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 PQLC1Q8N2U9 271 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 OR2T33Q8NG76 320 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 LINC01560Q8TB33 94 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 HDAC2Q92769 488 aaKnown RBP15.04■□□□□ -0
HDAC6-235ENST00000495515 WFIKKN1Q96NZ8 548 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 KCNK17Q96T54 332 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 TSSK6Q9BXA6 273 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 TEX12Q9BXU0 123 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 OAZ3Q9UMX2 235 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 MAGED1Q9Y5V3 778 aaPredicted RBP15.04■□□□□ -0
HDAC6-235ENST00000495515 MAST4O15021 2626 aa15.04■□□□□ -0
HDAC6-235ENST00000495515 PRSS37A4D1T9 235 aa15.03■□□□□ -0
HDAC6-235ENST00000495515 SAC3D1A6NKF1 404 aa15.03■□□□□ -0
HDAC6-235ENST00000495515 OR5H1A6NKK0 313 aa15.03■□□□□ -0
HDAC6-235ENST00000495515 SOCS2O14508 198 aa15.03■□□□□ -0
HDAC6-235ENST00000495515 DHHO43323 396 aa15.03■□□□□ -0
HDAC6-235ENST00000495515 EPXP11678 715 aa15.03■□□□□ -0
HDAC6-235ENST00000495515 HOXB1P14653 301 aaPredicted RBP15.03■□□□□ -0
HDAC6-235ENST00000495515 PAX7P23759 505 aa15.03■□□□□ -0
HDAC6-235ENST00000495515 FOXG1P55316 489 aaPredicted RBP15.03■□□□□ -0
HDAC6-235ENST00000495515 ARF1P84077 181 aaKnown RBP15.03■□□□□ -0
HDAC6-235ENST00000495515 SNTB1Q13884 538 aaKnown RBP15.03■□□□□ -0
HDAC6-235ENST00000495515 PHYHD1Q5SRE7 291 aa15.03■□□□□ -0
HDAC6-235ENST00000495515 LRFN4Q6PJG9 635 aa15.03■□□□□ -0
HDAC6-235ENST00000495515 LINGO2Q7L985 606 aa15.03■□□□□ -0
HDAC6-235ENST00000495515 WDFY1Q8IWB7 410 aa15.03■□□□□ -0
HDAC6-235ENST00000495515 PARP8Q8N3A8 854 aa15.03■□□□□ -0
HDAC6-235ENST00000495515 OR1K1Q8NGR3 316 aa15.03■□□□□ -0
HDAC6-235ENST00000495515 MCHR2Q969V1 340 aa15.03■□□□□ -0
HDAC6-235ENST00000495515 RASD2Q96D21 266 aa15.03■□□□□ -0
HDAC6-235ENST00000495515 BOD1Q96IK1 185 aa15.03■□□□□ -0
HDAC6-235ENST00000495515 RBM4BQ9BQ04 359 aaKnown RBP15.03■□□□□ -0
HDAC6-235ENST00000495515 RBM4Q9BWF3 364 aaKnown RBP15.03■□□□□ -0
HDAC6-235ENST00000495515 NGBQ9NPG2 151 aa15.03■□□□□ -0
HDAC6-235ENST00000495515 OBP2BQ9NPH6 170 aa15.03■□□□□ -0
HDAC6-235ENST00000495515 KRT84Q9NSB2 600 aa15.03■□□□□ -0
HDAC6-235ENST00000495515 CRIM1Q9NZV1 1036 aa15.03■□□□□ -0
HDAC6-235ENST00000495515 WNT11O96014 354 aa15.02■□□□□ -0
HDAC6-235ENST00000495515 COL8A1P27658 744 aa15.02■□□□□ -0
HDAC6-235ENST00000495515 POU1F1P28069 291 aa15.02■□□□□ -0
HDAC6-235ENST00000495515 GUCA1AP43080 201 aaPredicted RBP15.02■□□□□ -0
HDAC6-235ENST00000495515 DAPP51397 102 aa15.02■□□□□ -0
HDAC6-235ENST00000495515 ZNF133P52736 654 aaPredicted RBP15.02■□□□□ -0
HDAC6-235ENST00000495515 UBE2NP61088 152 aaKnown RBP15.02■□□□□ -0
HDAC6-235ENST00000495515 MESTQ5EB52 335 aa15.02■□□□□ -0
HDAC6-235ENST00000495515 C10orf128Q5T292 105 aa15.02■□□□□ -0
HDAC6-235ENST00000495515 CCDC36Q8IYA8 594 aa15.02■□□□□ -0
HDAC6-235ENST00000495515 LNX2Q8N448 690 aa15.02■□□□□ -0
HDAC6-235ENST00000495515 SNX18Q96RF0 628 aa15.02■□□□□ -0
HDAC6-235ENST00000495515 FOXB1Q99853 325 aa15.02■□□□□ -0
HDAC6-235ENST00000495515 PLA2G12AQ9BZM1 189 aa15.02■□□□□ -0
HDAC6-235ENST00000495515 MOV10Q9HCE1 1003 aaKnown RBP15.02■□□□□ -0
HDAC6-235ENST00000495515 REV1Q9UBZ9 1251 aa15.02■□□□□ -0
HDAC6-235ENST00000495515 AMDHD2Q9Y303 409 aa15.02■□□□□ -0
HDAC6-235ENST00000495515 SLC22A23A1A5C7 686 aa15.01□□□□□ -0.01
HDAC6-235ENST00000495515 H0YHG0 523 aa15.01□□□□□ -0.01
HDAC6-235ENST00000495515 BHLHE40O14503 412 aa15.01□□□□□ -0.01
HDAC6-235ENST00000495515 MGRN1O60291 552 aa15.01□□□□□ -0.01
HDAC6-235ENST00000495515 GOSR1O95249 250 aa15.01□□□□□ -0.01
HDAC6-235ENST00000495515 FARS2O95363 451 aaKnown RBP15.01□□□□□ -0.01
HDAC6-235ENST00000495515 RENP00797 406 aa15.01□□□□□ -0.01
HDAC6-235ENST00000495515 IFNGP01579 166 aa15.01□□□□□ -0.01
HDAC6-235ENST00000495515 ESRRGP62508 458 aa15.01□□□□□ -0.01
HDAC6-235ENST00000495515 MYBPC1Q00872 1141 aa15.01□□□□□ -0.01
HDAC6-235ENST00000495515 PPA1Q15181 289 aa15.01□□□□□ -0.01
HDAC6-235ENST00000495515 TAB1Q15750 504 aa15.01□□□□□ -0.01
HDAC6-235ENST00000495515 TBRG1Q3YBR2 411 aa15.01□□□□□ -0.01
HDAC6-235ENST00000495515 NRN1LQ496H8 165 aa15.01□□□□□ -0.01
HDAC6-235ENST00000495515 KDM4DQ6B0I6 523 aa15.01□□□□□ -0.01
HDAC6-235ENST00000495515 SLC27A4Q6P1M0 643 aa15.01□□□□□ -0.01
HDAC6-235ENST00000495515 DNM1P34Q6PK57 102 aa15.01□□□□□ -0.01
HDAC6-235ENST00000495515 ZNF813Q6ZN06 617 aa15.01□□□□□ -0.01
HDAC6-235ENST00000495515 OR8D4Q8NGM9 314 aa15.01□□□□□ -0.01
HDAC6-235ENST00000495515 OR4K13Q8NH42 304 aa15.01□□□□□ -0.01
HDAC6-235ENST00000495515 BCL2L2Q92843 193 aaPredicted RBP15.01□□□□□ -0.01
HDAC6-235ENST00000495515 ZC3HAV1LQ96H79 300 aaKnown RBP15.01□□□□□ -0.01
HDAC6-235ENST00000495515 C9orf16Q9BUW7 83 aa15.01□□□□□ -0.01
HDAC6-235ENST00000495515 SLC17A5Q9NRA2 495 aa15.01□□□□□ -0.01
HDAC6-235ENST00000495515 VSX1Q9NZR4 365 aaPredicted RBP15.01□□□□□ -0.01
HDAC6-235ENST00000495515 KLHL21Q9UJP4 597 aa15.01□□□□□ -0.01
HDAC6-235ENST00000495515 ORC6Q9Y5N6 252 aa15.01□□□□□ -0.01
HDAC6-235ENST00000495515 TP53P04637 393 aaPredicted RBP15□□□□□ -0.01
HDAC6-235ENST00000495515 IGFBP1P08833 259 aaPredicted RBP15□□□□□ -0.01
HDAC6-235ENST00000495515 HIST1H1CP16403 213 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms