RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 IMPA2O14732 288 aa17.01■□□□□ 0.31
HDAC4-212ENST00000495497 DHHO43323 396 aa17.01■□□□□ 0.31
HDAC4-212ENST00000495497 DEAF1O75398 565 aaPredicted RBP17.01■□□□□ 0.31
HDAC4-212ENST00000495497 B4GALT1P15291 398 aa17.01■□□□□ 0.31
HDAC4-212ENST00000495497 LOXP28300 417 aaPredicted RBP17.01■□□□□ 0.31
HDAC4-212ENST00000495497 CD47Q08722 323 aa17.01■□□□□ 0.31
HDAC4-212ENST00000495497 GK3PQ14409 553 aa17.01■□□□□ 0.31
HDAC4-212ENST00000495497 ATP6AP1Q15904 470 aa17.01■□□□□ 0.31
HDAC4-212ENST00000495497 MESTQ5EB52 335 aa17.01■□□□□ 0.31
HDAC4-212ENST00000495497 CLEC12AQ5QGZ9 265 aa17.01■□□□□ 0.31
HDAC4-212ENST00000495497 ANKRD16Q6P6B7 361 aa17.01■□□□□ 0.31
HDAC4-212ENST00000495497 KLHL24Q6TFL4 600 aa17.01■□□□□ 0.31
HDAC4-212ENST00000495497 OR8D4Q8NGM9 314 aa17.01■□□□□ 0.31
HDAC4-212ENST00000495497 PLPPR2Q96GM1 343 aa17.01■□□□□ 0.31
HDAC4-212ENST00000495497 ERMAPQ96PL5 475 aaPredicted RBP17.01■□□□□ 0.31
HDAC4-212ENST00000495497 RAB3IPQ96QF0 476 aaPredicted RBP17.01■□□□□ 0.31
HDAC4-212ENST00000495497 IFT27Q9BW83 186 aa17.01■□□□□ 0.31
HDAC4-212ENST00000495497 PLA2G12AQ9BZM1 189 aa17.01■□□□□ 0.31
HDAC4-212ENST00000495497 DENND2DQ9H6A0 471 aaPredicted RBP17.01■□□□□ 0.31
HDAC4-212ENST00000495497 FBN2P35556 2912 aa17.01■□□□□ 0.31
HDAC4-212ENST00000495497 DCHS2Q6V1P9 2916 aa17■□□□□ 0.31
HDAC4-212ENST00000495497 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17■□□□□ 0.31
HDAC4-212ENST00000495497 A0A1W2PPR1 153 aa17■□□□□ 0.31
HDAC4-212ENST00000495497 A6NIZ1 184 aa17■□□□□ 0.31
HDAC4-212ENST00000495497 CENPBD1B2RD01 187 aa17■□□□□ 0.31
HDAC4-212ENST00000495497 ANKRD65E5RJM6 399 aa17■□□□□ 0.31
HDAC4-212ENST00000495497 SOCS2O14508 198 aa17■□□□□ 0.31
HDAC4-212ENST00000495497 SOX14O95416 240 aa17■□□□□ 0.31
HDAC4-212ENST00000495497 TP53P04637 393 aaPredicted RBP17■□□□□ 0.31
HDAC4-212ENST00000495497 FASP25445 335 aa17■□□□□ 0.31
HDAC4-212ENST00000495497 HOXC12P31275 282 aa17■□□□□ 0.31
HDAC4-212ENST00000495497 SLC6A6P31641 620 aa17■□□□□ 0.31
HDAC4-212ENST00000495497 ZNF83P51522 516 aa17■□□□□ 0.31
HDAC4-212ENST00000495497 SH3BGRP55822 239 aaPredicted RBP17■□□□□ 0.31
HDAC4-212ENST00000495497 RAP1BP61224 184 aa17■□□□□ 0.31
HDAC4-212ENST00000495497 RAP1AP62834 184 aa17■□□□□ 0.31
HDAC4-212ENST00000495497 ZSCAN26Q16670 478 aa17■□□□□ 0.31
HDAC4-212ENST00000495497 ZNF813Q6ZN06 617 aa17■□□□□ 0.31
HDAC4-212ENST00000495497 RASSF6Q6ZTQ3 369 aa17■□□□□ 0.31
HDAC4-212ENST00000495497 C17orf78Q8N4C9 275 aa17■□□□□ 0.31
HDAC4-212ENST00000495497 MAGEE2Q8TD90 523 aaPredicted RBP17■□□□□ 0.31
HDAC4-212ENST00000495497 NSMAFQ92636 917 aa17■□□□□ 0.31
HDAC4-212ENST00000495497 NMD3Q96D46 503 aaKnown RBP17■□□□□ 0.31
HDAC4-212ENST00000495497 BOD1Q96IK1 185 aa17■□□□□ 0.31
HDAC4-212ENST00000495497 FOXB1Q99853 325 aa17■□□□□ 0.31
HDAC4-212ENST00000495497 ALG12Q9BV10 488 aa17■□□□□ 0.31
HDAC4-212ENST00000495497 CLEC4MQ9H2X3 399 aaPredicted RBP17■□□□□ 0.31
HDAC4-212ENST00000495497 STX18Q9P2W9 335 aaKnown RBP17■□□□□ 0.31
HDAC4-212ENST00000495497 AMDHD2Q9Y303 409 aa17■□□□□ 0.31
HDAC4-212ENST00000495497 CDH10Q9Y6N8 788 aa17■□□□□ 0.31
HDAC4-212ENST00000495497 ZNF503-AS2A6NEH8 195 aa16.99■□□□□ 0.31
HDAC4-212ENST00000495497 DPRXA6NFQ7 191 aa16.99■□□□□ 0.31
HDAC4-212ENST00000495497 SDHAP31040 664 aa16.99■□□□□ 0.31
HDAC4-212ENST00000495497 RPS6KA3P51812 740 aa16.99■□□□□ 0.31
HDAC4-212ENST00000495497 KRR1Q13601 381 aaKnown RBP16.99■□□□□ 0.31
HDAC4-212ENST00000495497 BEX5Q5H9J7 111 aa16.99■□□□□ 0.31
HDAC4-212ENST00000495497 FAM205BPQ63HN1 556 aa16.99■□□□□ 0.31
HDAC4-212ENST00000495497 SHQ1Q6PI26 577 aaKnown RBP16.99■□□□□ 0.31
HDAC4-212ENST00000495497 SLC25A47Q6Q0C1 308 aa16.99■□□□□ 0.31
HDAC4-212ENST00000495497 PTCHD4Q6ZW05 846 aa16.99■□□□□ 0.31
HDAC4-212ENST00000495497 RBP7Q96R05 134 aa16.99■□□□□ 0.31
HDAC4-212ENST00000495497 SEMA6AQ9H2E6 1030 aa16.99■□□□□ 0.31
HDAC4-212ENST00000495497 PRR14LQ5THK1 2151 aa16.99■□□□□ 0.31
HDAC4-212ENST00000495497 UNC79Q9P2D8 2635 aa16.99■□□□□ 0.31
HDAC4-212ENST00000495497 SETXQ7Z333 2677 aaKnown RBP16.98■□□□□ 0.31
HDAC4-212ENST00000495497 ARRDC5A6NEK1 342 aa16.98■□□□□ 0.31
HDAC4-212ENST00000495497 H3BNX3 289 aa16.98■□□□□ 0.31
HDAC4-212ENST00000495497 M0R1B8 84 aa16.98■□□□□ 0.31
HDAC4-212ENST00000495497 XKRYO14609 159 aa16.98■□□□□ 0.31
HDAC4-212ENST00000495497 TXNDC12O95881 172 aa16.98■□□□□ 0.31
HDAC4-212ENST00000495497 PLAUP00749 431 aa16.98■□□□□ 0.31
HDAC4-212ENST00000495497 GSTM3P21266 225 aa16.98■□□□□ 0.31
HDAC4-212ENST00000495497 CDAP32320 146 aa16.98■□□□□ 0.31
HDAC4-212ENST00000495497 CDKN2AP42771 156 aaKnown RBP16.98■□□□□ 0.31
HDAC4-212ENST00000495497 CAPZA2P47755 286 aa16.98■□□□□ 0.31
HDAC4-212ENST00000495497 ZNF133P52736 654 aaPredicted RBP16.98■□□□□ 0.31
HDAC4-212ENST00000495497 UBE2NP61088 152 aaKnown RBP16.98■□□□□ 0.31
HDAC4-212ENST00000495497 DBPQ10586 325 aaPredicted RBP16.98■□□□□ 0.31
HDAC4-212ENST00000495497 C10orf128Q5T292 105 aa16.98■□□□□ 0.31
HDAC4-212ENST00000495497 GPR139Q6DWJ6 353 aa16.98■□□□□ 0.31
HDAC4-212ENST00000495497 KLHL17Q6TDP4 642 aa16.98■□□□□ 0.31
HDAC4-212ENST00000495497 CDC20BQ86Y33 519 aa16.98■□□□□ 0.31
HDAC4-212ENST00000495497 OR5K1Q8NHB7 308 aa16.98■□□□□ 0.31
HDAC4-212ENST00000495497 NRGNQ92686 78 aa16.98■□□□□ 0.31
HDAC4-212ENST00000495497 TBC1D23Q9NUY8 699 aa16.98■□□□□ 0.31
HDAC4-212ENST00000495497 IL20Q9NYY1 176 aa16.98■□□□□ 0.31
HDAC4-212ENST00000495497 REV1Q9UBZ9 1251 aa16.98■□□□□ 0.31
HDAC4-212ENST00000495497 UGT2A1Q9Y4X1 527 aa16.98■□□□□ 0.31
HDAC4-212ENST00000495497 SLC22A23A1A5C7 686 aa16.97■□□□□ 0.31
HDAC4-212ENST00000495497 PRSS37A4D1T9 235 aa16.97■□□□□ 0.31
HDAC4-212ENST00000495497 ENTPD5O75356 428 aa16.97■□□□□ 0.31
HDAC4-212ENST00000495497 WNT11O96014 354 aa16.97■□□□□ 0.31
HDAC4-212ENST00000495497 HIST1H1CP16403 213 aaKnown RBP16.97■□□□□ 0.31
HDAC4-212ENST00000495497 ZNF84P51523 738 aa16.97■□□□□ 0.31
HDAC4-212ENST00000495497 ARHGDIAP52565 204 aa16.97■□□□□ 0.31
HDAC4-212ENST00000495497 BSPH1Q075Z2 132 aa16.97■□□□□ 0.31
HDAC4-212ENST00000495497 ETFDHQ16134 617 aa16.97■□□□□ 0.31
HDAC4-212ENST00000495497 THEM4Q5T1C6 240 aa16.97■□□□□ 0.31
HDAC4-212ENST00000495497 SLC35F1Q5T1Q4 408 aa16.97■□□□□ 0.31
HDAC4-212ENST00000495497 NCMAPQ5T1S8 102 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms