RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 LOC102725191A0A1B0GVB3 256 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 IQCMA0A1B0GVH7 501 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 A0A1B0GX12 115 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 SLC22A23A1A5C7 686 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 C17orf100A8MU93 164 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 CLDN25C9JDP6 229 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 PLPP3O14495 311 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 WIPF1O43516 503 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 SNNO75324 88 aaPredicted RBP8.24□□□□□ -1.09
UBR4-216ENST00000494503 CH25HO95992 272 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 OPN1SWP03999 348 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 SERPINA5P05154 406 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 PPIBP23284 216 aaKnown RBP8.24□□□□□ -1.09
UBR4-216ENST00000494503 APLNRP35414 380 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 TEKQ02763 1124 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 FXNQ16595 210 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 CYP51A1Q16850 503 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 HFEQ30201 348 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 SLC36A2Q495M3 483 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 SPATA46Q5T0L3 261 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 RBMS3Q6XE24 437 aaKnown RBP8.24□□□□□ -1.09
UBR4-216ENST00000494503 USP51Q70EK9 711 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 SLC35D2Q76EJ3 337 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 SLC16A14Q7RTX9 510 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 PIWIL3Q7Z3Z3 882 aaKnown RBP8.24□□□□□ -1.09
UBR4-216ENST00000494503 MAVSQ7Z434 540 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 NANOGNBQ7Z5D8 188 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 PXKQ7Z7A4 578 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 CROCCP2Q86T23 111 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 TREML1Q86YW5 311 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 WDFY1Q8IWB7 410 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 RBM15BQ8NDT2 890 aaKnown RBP8.24□□□□□ -1.09
UBR4-216ENST00000494503 OR4K5Q8NGD3 323 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 FGFBP3Q8TAT2 258 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 ZFAND2BQ8WV99 257 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 MAELQ96JY0 434 aaKnown RBP8.24□□□□□ -1.09
UBR4-216ENST00000494503 MCHR1Q99705 422 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 SUCNR1Q9BXA5 334 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 PARD6BQ9BYG5 372 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 KCNN2Q9H2S1 579 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 DENND2DQ9H6A0 471 aaPredicted RBP8.24□□□□□ -1.09
UBR4-216ENST00000494503 ZNF385DQ9H6B1 395 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 SAP30LQ9HAJ7 183 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 NANSQ9NR45 359 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 SLCO1C1Q9NYB5 712 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 SLC25A37Q9NYZ2 338 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 GLTPQ9NZD2 209 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 ZNF224Q9NZL3 707 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 SLAMF8Q9P0V8 285 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 CORO2BQ9UQ03 480 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 USH1CQ9Y6N9 552 aa8.24□□□□□ -1.09
UBR4-216ENST00000494503 PLSCR5A0PG75 271 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 SPRY3O43610 288 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 PLPP2O43688 288 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 MT-ATP6P00846 226 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 PTHP01270 115 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 IGHG1P01857 330 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 VIMP08670 466 aaKnown RBP8.23□□□□□ -1.09
UBR4-216ENST00000494503 QDPRP09417 244 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 ZNF84P51523 738 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 HILS1P60008 231 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 MAGOHP61326 146 aaKnown RBP8.23□□□□□ -1.09
UBR4-216ENST00000494503 LMO4P61968 165 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 PCGF3Q3KNV8 242 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 TTC33Q6PID6 262 aaPredicted RBP8.23□□□□□ -1.09
UBR4-216ENST00000494503 ZNF584Q8IVC4 421 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 C10orf111Q8N326 155 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 PAQR4Q8N4S7 273 aaPredicted RBP8.23□□□□□ -1.09
UBR4-216ENST00000494503 SYT14Q8NB59 555 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 HIPK4Q8NE63 616 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 BHLHE22Q8NFJ8 381 aaPredicted RBP8.23□□□□□ -1.09
UBR4-216ENST00000494503 OR1J2Q8NGS2 313 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 OR1J1Q8NGS3 322 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 OR6S1Q8NH40 331 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 SGMS2Q8NHU3 365 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 NANPQ8TBE9 248 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 SLC26A7Q8TE54 656 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 FAM216AQ8WUB2 273 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 CCL17Q92583 94 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 GTF3AQ92664 365 aaKnown RBP8.23□□□□□ -1.09
UBR4-216ENST00000494503 RAB1CQ92928 201 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 SPDL1Q96EA4 605 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 SLC41A3Q96GZ6 507 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 TMEM43Q9BTV4 400 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 CCNB1IP1Q9NPC3 277 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 TCF7L2Q9NQB0 619 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 DDX28Q9NUL7 540 aaKnown RBP8.23□□□□□ -1.09
UBR4-216ENST00000494503 TMEM38BQ9NVV0 291 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 PPIAL4AQ9Y536 164 aa8.23□□□□□ -1.09
UBR4-216ENST00000494503 BLOC1S5-TXNDC5H3BN57 136 aa8.22□□□□□ -1.09
UBR4-216ENST00000494503 DHHO43323 396 aa8.22□□□□□ -1.09
UBR4-216ENST00000494503 RP2O75695 350 aa8.22□□□□□ -1.09
UBR4-216ENST00000494503 BMP2P12643 396 aa8.22□□□□□ -1.09
UBR4-216ENST00000494503 GCH1P30793 250 aa8.22□□□□□ -1.09
UBR4-216ENST00000494503 LIMS1P48059 325 aa8.22□□□□□ -1.09
UBR4-216ENST00000494503 ZNF81P51508 661 aa8.22□□□□□ -1.09
UBR4-216ENST00000494503 LCN2P80188 198 aa8.22□□□□□ -1.09
UBR4-216ENST00000494503 MRPS11P82912 194 aaKnown RBP8.22□□□□□ -1.09
UBR4-216ENST00000494503 ZP4Q12836 540 aa8.22□□□□□ -1.09
UBR4-216ENST00000494503 MOGQ16653 247 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms