RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 STON2Q8WXE9 905 aa5.69□□□□□ -1.5
FN1-225ENST00000494446 RAB40AQ8WXH6 277 aa5.69□□□□□ -1.5
FN1-225ENST00000494446 OR7D2Q96RA2 312 aa5.69□□□□□ -1.5
FN1-225ENST00000494446 TAPBPLQ9BX59 468 aa5.69□□□□□ -1.5
FN1-225ENST00000494446 TMEM120AQ9BXJ8 343 aa5.69□□□□□ -1.5
FN1-225ENST00000494446 EGLN1Q9GZT9 426 aa5.69□□□□□ -1.5
FN1-225ENST00000494446 DENND2DQ9H6A0 471 aaPredicted RBP5.69□□□□□ -1.5
FN1-225ENST00000494446 THAP1Q9NVV9 213 aa5.69□□□□□ -1.5
FN1-225ENST00000494446 TMEM216Q9P0N5 145 aa5.69□□□□□ -1.5
FN1-225ENST00000494446 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.69□□□□□ -1.5
FN1-225ENST00000494446 DNAH1Q9P2D7 4330 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 IGHV2-70DA0A0C4DH43 119 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 LCE6AA0A183 80 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 A8MT66 165 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 TMEM114B3SHH9 223 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 F5H0A9 414 aaPredicted RBP5.68□□□□□ -1.5
FN1-225ENST00000494446 G3V2L1 256 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 M0R3G1 203 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 SEC22BO75396 215 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 STX11O75558 287 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 VAMP5O95183 116 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 IGHV1-46P01743 117 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 PATE4P0C8F1 98 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 MYL2P10916 166 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 NEFHP12036 1026 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 CCL2P13500 99 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 IGLL1P15814 213 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 FRKP42685 505 aaPredicted RBP5.68□□□□□ -1.5
FN1-225ENST00000494446 RASSF2P50749 326 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 P2RY4P51582 365 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 PRKAA2P54646 552 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 AQP5P55064 265 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 BPIFB3P59826 476 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 FGF12P61328 243 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 PAX2Q02962 417 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 RBBP4Q09028 425 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 STX3Q13277 289 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 CAMK2DQ13557 499 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 KRT72Q14CN4 511 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 MAPK14Q16539 360 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 TMEM155Q4W5P6 130 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 UNC50Q53HI1 259 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 SPRNQ5BIV9 151 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 FAM209AQ5JX71 171 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 HMGN2P46Q86SG4 172 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 LRRC28Q86X40 367 aaPredicted RBP5.68□□□□□ -1.5
FN1-225ENST00000494446 FAM71CQ8NEG0 241 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 CLHC1Q8NHS4 586 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 ZNF519Q8TB69 540 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 GEMIN6Q8WXD5 167 aaKnown RBP5.68□□□□□ -1.5
FN1-225ENST00000494446 SLC7A6OSQ96CW6 309 aaPredicted RBP5.68□□□□□ -1.5
FN1-225ENST00000494446 THOC1Q96FV9 657 aaKnown RBP5.68□□□□□ -1.5
FN1-225ENST00000494446 TBX15Q96SF7 602 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 ZNF382Q96SR6 550 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 SORT1Q99523 831 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 PRPF18Q99633 342 aaKnown RBP5.68□□□□□ -1.5
FN1-225ENST00000494446 PCGF1Q9BSM1 259 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 SSBP3Q9BWW4 388 aaPredicted RBP5.68□□□□□ -1.5
FN1-225ENST00000494446 C20orf27Q9GZN8 174 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 MMP28Q9H239 520 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 REEP4Q9H6H4 257 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 TMEM165Q9HC07 324 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 HAO1Q9UJM8 370 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 FOXJ3Q9UPW0 622 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 RCE1Q9Y256 329 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 RASD1Q9Y272 281 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 SLC35A3Q9Y2D2 325 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 LRCH1Q9Y2L9 728 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 CSMD3Q7Z407 3707 aa5.68□□□□□ -1.5
FN1-225ENST00000494446 A0A0G2JND7 137 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 KIR2DS1A0A191URI9 304 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 PLSCR5A0PG75 271 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 SERTM1A2A2V5 107 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 TNFRSF13BO14836 293 aaPredicted RBP5.67□□□□□ -1.5
FN1-225ENST00000494446 ITM2AO43736 263 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 TSPAN9O75954 239 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 UBL3O95164 117 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 ATP6V1G2O95670 118 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 ENO1P06733 434 aaKnown RBP5.67□□□□□ -1.5
FN1-225ENST00000494446 THRBP10828 461 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 CPA3P15088 417 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 B4GALT1P15291 398 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 ZNF43P17038 809 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 UQCRC2P22695 453 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 CXCR1P25024 350 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 MSX2P35548 267 aaPredicted RBP5.67□□□□□ -1.5
FN1-225ENST00000494446 IER3P46695 156 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 SLC1A6P48664 564 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 RPS26P62854 115 aaKnown RBP5.67□□□□□ -1.5
FN1-225ENST00000494446 BNIP2Q12982 314 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 C1DQ13901 141 aaKnown RBP5.67□□□□□ -1.5
FN1-225ENST00000494446 ZMYND11Q15326 602 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 ARHGAP11BQ3KRB8 267 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 PHYHD1Q5SRE7 291 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 ZBTB37Q5TC79 503 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 CARD17Q5XLA6 110 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 SLC35E4Q6ICL7 350 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 ZYG11AQ6WRX3 759 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 ZCCHC23Q6ZST2 131 aa5.67□□□□□ -1.5
FN1-225ENST00000494446 RNF130Q86XS8 419 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms