RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 CCL4L1Q8NHW4 92 aa10.43□□□□□ -0.74
RFC4-214ENST00000494047 OTOSQ8NHW6 89 aa10.43□□□□□ -0.74
RFC4-214ENST00000494047 ZNF563Q8TA94 476 aa10.43□□□□□ -0.74
RFC4-214ENST00000494047 LRRC20Q8TCA0 184 aa10.43□□□□□ -0.74
RFC4-214ENST00000494047 STK35Q8TDR2 534 aa10.43□□□□□ -0.74
RFC4-214ENST00000494047 DAZLQ92904 295 aaKnown RBP10.43□□□□□ -0.74
RFC4-214ENST00000494047 ZDHHC12Q96GR4 267 aa10.43□□□□□ -0.74
RFC4-214ENST00000494047 PDE7BQ9NP56 450 aa10.43□□□□□ -0.74
RFC4-214ENST00000494047 MGAT4CQ9UBM8 478 aa10.43□□□□□ -0.74
RFC4-214ENST00000494047 OR5V1Q9UGF6 321 aa10.43□□□□□ -0.74
RFC4-214ENST00000494047 KCNN3Q9UGI6 736 aa10.43□□□□□ -0.74
RFC4-214ENST00000494047 FBXL4Q9UKA2 621 aa10.43□□□□□ -0.74
RFC4-214ENST00000494047 IKZF2Q9UKS7 526 aa10.43□□□□□ -0.74
RFC4-214ENST00000494047 COPS3Q9UNS2 423 aa10.43□□□□□ -0.74
RFC4-214ENST00000494047 ADAM18Q9Y3Q7 739 aa10.43□□□□□ -0.74
RFC4-214ENST00000494047 THADAQ6YHU6 1953 aa10.43□□□□□ -0.74
RFC4-214ENST00000494047 ABCA7Q8IZY2 2146 aa10.43□□□□□ -0.74
RFC4-214ENST00000494047 LOC100289279A0A1B0GTE1 492 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 TCRBV21S2A2A0A5A6 115 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 GGT3PA6NGU5 568 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 ACOD1A6NK06 481 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 KRBOX1C9JBD0 128 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 SLC17A2O00624 439 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 DVL2O14641 736 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 AKR7A2O43488 359 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 B3GALNT1O75752 331 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 PMS2P2O95744 297 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 PVRP15151 417 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 ST6GAL1P15907 406 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 ALOX5APP20292 161 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 NFYAP23511 347 aaPredicted RBP10.42□□□□□ -0.74
RFC4-214ENST00000494047 CXCR1P25024 350 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 CALCRP30988 508 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 LSSP48449 732 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 VEGFCP49767 419 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 TAS2R19P59542 299 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 PSMA6P60900 246 aaKnown RBP10.42□□□□□ -0.74
RFC4-214ENST00000494047 ROM1Q03395 351 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 PUDPQ08623 228 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 MADCAM1Q13477 382 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 EXOSC2Q13868 293 aaKnown RBP10.42□□□□□ -0.74
RFC4-214ENST00000494047 CBFBQ13951 182 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 ELAVL1Q15717 326 aaKnown RBP10.42□□□□□ -0.74
RFC4-214ENST00000494047 RAB11BQ15907 218 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 CSRP2Q16527 193 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 CLVS2Q5SYC1 327 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 HES5Q5TA89 166 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 HLA-DQA1Q5Y7H0 255 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 SLC25A25Q6KCM7 469 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 TMPRSS12Q86WS5 348 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 ZNF679Q8IYX0 411 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 OR13H1Q8NG92 308 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 OR13C5Q8NGS8 318 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 PHOSPHO1Q8TCT1 267 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 MCHR2Q969V1 340 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 RASD2Q96D21 266 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 NUDT16L1Q9BRJ7 211 aaKnown RBP10.42□□□□□ -0.74
RFC4-214ENST00000494047 ADAM19Q9H013 955 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 METTL17Q9H7H0 456 aaPredicted RBP10.42□□□□□ -0.74
RFC4-214ENST00000494047 AUNIPQ9H7T9 357 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 HEXA-AS1Q9H8Q6 139 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 COPS7AQ9UBW8 275 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 PFDN2Q9UHV9 154 aa10.42□□□□□ -0.74
RFC4-214ENST00000494047 GON4LQ3T8J9 2241 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 CEP250Q9BV73 2442 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 IGKV1D-42A0A075B6H8 117 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 A0A0A6YYC8 382 aaPredicted RBP10.41□□□□□ -0.74
RFC4-214ENST00000494047 A0A1W2PPL8 197 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 TMEM200CA6NKL6 621 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 OR4C45A6NMZ5 311 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 ALG1L2C9J202 215 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 H0Y8X5 98 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 BLOC1S5-TXNDC5H3BN57 136 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 I3L1I5 382 aaPredicted RBP10.41□□□□□ -0.74
RFC4-214ENST00000494047 ARPC1BO15143 372 aaKnown RBP10.41□□□□□ -0.74
RFC4-214ENST00000494047 PIN1P1O15428 100 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 FOXS1O43638 330 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 PROS1P07225 676 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 THEGLP0DJG4 465 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 PPP3CBP16298 524 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 CXCL3P19876 107 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 TBPP20226 339 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 CDK2P24941 298 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 IL12BP29460 328 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 CSF2RBP32927 897 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 PRSS3P35030 304 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 SUMO3P55854 103 aaPredicted RBP10.41□□□□□ -0.74
RFC4-214ENST00000494047 SRSF5Q13243 272 aaKnown RBP10.41□□□□□ -0.74
RFC4-214ENST00000494047 MEF2DQ14814 521 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 TEX30Q5JUR7 227 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 C3P1Q6ZMU1 363 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 ZNF704Q6ZNC4 412 aaPredicted RBP10.41□□□□□ -0.74
RFC4-214ENST00000494047 NLRC3Q7RTR2 1065 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 LRRTM1Q86UE6 522 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 ZNF248Q8NDW4 579 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 OR4D9Q8NGE8 314 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 OR6M1Q8NGM8 313 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 OR6N2Q8NGY6 317 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 SCARB1Q8WTV0 552 aa10.41□□□□□ -0.74
RFC4-214ENST00000494047 THEM6Q8WUY1 208 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms