RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 A0A1W2PP18 115 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 A0A1W2PPM1 405 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 OR14I1A6ND48 311 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 EREGO14944 169 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 OGG1O15527 345 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 ORC5O43913 435 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 CTSVO60911 334 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 ICOSLGO75144 302 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 SCRG1O75711 98 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 STK17BO94768 372 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 CLDN9O95484 217 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 LPLP06858 475 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 ZNF28P17035 718 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 MNDAP41218 407 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 SELENOTP62341 195 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 ADARB1P78563 741 aaKnown RBP10.55□□□□□ -0.72
BRCA1-222ENST00000493919 RPL19P84098 196 aaKnown RBP10.55□□□□□ -0.72
BRCA1-222ENST00000493919 IRF8Q02556 426 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 UBAP2LQ14157 1087 aaKnown RBP10.55□□□□□ -0.72
BRCA1-222ENST00000493919 SLBPQ14493 270 aaKnown RBP eCLIP10.55□□□□□ -0.72
BRCA1-222ENST00000493919 PRAMEF17Q5VTA0 474 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 PWWP2BQ6NUJ5 590 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 PET117Q6UWS5 81 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 C3P1Q6ZMU1 363 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 TMPRSS11BQ86T26 416 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 LRRC28Q86X40 367 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-222ENST00000493919 PDZD9Q8IXQ8 264 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 RHEBL1Q8TAI7 183 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 SPPL2AQ8TCT8 520 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 MZB1Q8WU39 189 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 FAM222BQ8WU58 562 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 LRTOMTQ8WZ04 291 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 ASB9Q96DX5 294 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 PRAP1Q96NZ9 151 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 OR4K3Q96R72 315 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 PIGQQ9BRB3 760 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 ALG8Q9BVK2 526 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 SUCNR1Q9BXA5 334 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 CHST5Q9GZS9 411 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 OR10A5Q9H207 317 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 RGCCQ9H4X1 137 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 ZFP64Q9NPA5 681 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 HIF1ANQ9NWT6 349 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 DNAJB11Q9UBS4 358 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 DKK4Q9UBT3 224 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 DSPP15924 2871 aaKnown RBP10.55□□□□□ -0.72
BRCA1-222ENST00000493919 TRBC2A0A5B9 178 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 OR2A25A4D2G3 310 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 TMEM8BA6NDV4 472 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 H7C417 338 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 SOCS2O14508 198 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 SIAH2O43255 324 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 CTSBP07858 339 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 CALCBP10092 127 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 FGF5P12034 268 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 CPEP16870 476 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 HLA-GP17693 338 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 RCC1P18754 421 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-222ENST00000493919 AGTR2P50052 363 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 ATP5IP56385 69 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-222ENST00000493919 NRG3P56975 720 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 SPIBQ01892 262 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 TBCEQ15813 527 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-222ENST00000493919 TSTQ16762 297 aaKnown RBP10.54□□□□□ -0.72
BRCA1-222ENST00000493919 TIFABQ6ZNK6 161 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 ASB18Q6ZVZ8 466 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 SLC29A4Q7RTT9 530 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 PROSER1Q86XN7 944 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 OR2C3Q8N628 320 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 DUSP18Q8NEJ0 188 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 DUSP19Q8WTR2 217 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 KCNE4Q8WWG9 221 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 RORBQ92753 470 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 NEIL2Q969S2 332 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 C3orf30Q96M34 536 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 GPR78Q96P69 363 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 HOPXQ9BPY8 73 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-222ENST00000493919 C7orf50Q9BRJ6 194 aaKnown RBP10.54□□□□□ -0.72
BRCA1-222ENST00000493919 FUZQ9BT04 418 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 SLC29A3Q9BZD2 475 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 MMP28Q9H239 520 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 SERTAD3Q9UJW9 196 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 PADI2Q9Y2J8 665 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 LOC400499M0QZD8 3231 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 HEATR5BQ9P2D3 2071 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 DISC1C4P0D8 188 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 E7EQ34 232 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 UBDO15205 165 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 TAPBPO15533 448 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 F13BP05160 661 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 NPPBP16860 134 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 PCMT1P22061 227 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 CEACAM8P31997 349 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-222ENST00000493919 SLC6A12P48065 614 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 AQP5P55064 265 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 CDC42P60953 191 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 SPOCK1Q08629 439 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 PDZK1IP1Q13113 114 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 RCAN2Q14206 197 aa10.54□□□□□ -0.72
BRCA1-222ENST00000493919 SLC17A1Q14916 467 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms